CD02806

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD02806

CD02806

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• H2afx

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• H2A histone family, member X

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• H2a/x
• histone 5 protein 2ax
• histone H2A.x
• H2A histone family, member X

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• H2ax
• gammaH2ax
• Hist5-2ax
• H2A.X
• AW228881

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/15270

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• H2A histone family, member X
  http://metadb.riken.jp/db/mgi_rdf/MGI:102688

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_010436

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000049932

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.245931

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=601772

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• T. Nagata, et.al., Polyadenylated and 3' processed mRNAs are transcribed from the mouse histone H2A.X gene., Nucleic acids research, 1991, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/2041781
• P. Pantazis, et.al., Quantitative determination of histone modification. H2A acetylation and phosphorylation., The Journal of biological chemistry, 1981, 256
  http://rdf.ncbi.nlm.nih.gov/pubmed/7217105
• C. Porcher, et.al., Structure of the mouse H2A.X gene and physical linkage to the UPS locus on chromosome 9: assignment of the human H2A.X gene to 11q23 by sequence analysis., Genomics, 1995, 25
  http://rdf.ncbi.nlm.nih.gov/pubmed/7774939
• Beth A. Helmink, et.al., H2AX prevents CtIP-mediated DNA end resection and aberrant repair in G1-phase lymphocytes., Nature, 2011, 469
  http://rdf.ncbi.nlm.nih.gov/pubmed/21160476
• Shan. Zha, et.al., ATM damage response and XLF repair factor are functionally redundant in joining DNA breaks., Nature, 2011, 469
  http://rdf.ncbi.nlm.nih.gov/pubmed/21160472
• M H. West, et.al., Histone 2A, a heteromorphous family of eight protein species., Biochemistry, 1980, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/7407044
• H. Yagi, et.al., Regulation of the mouse histone H2A.X gene promoter by the transcription factor E2F and CCAAT binding protein., The Journal of biological chemistry, 1995, 270
  http://rdf.ncbi.nlm.nih.gov/pubmed/7642525
• Bu. Yin, et.al., Cellular context-dependent effects of H2ax and p53 deletion on the development of thymic lymphoma., Blood, 2011, 117
  http://rdf.ncbi.nlm.nih.gov/pubmed/20947684
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Buhe. Nashun, et.al., Changes in the nuclear deposition of histone H2A variants during pre-implantation development in mice., Development (Cambridge, England), 2010, 137
  http://rdf.ncbi.nlm.nih.gov/pubmed/20943707

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• replication fork
  http://purl.obolibrary.org/obo/GO_0005657
• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677
• chromatin
  http://purl.obolibrary.org/obo/GO_0000785
• male germ cell nucleus
  http://purl.obolibrary.org/obo/GO_0001673
• double-strand break repair via homologous recombination
  http://purl.obolibrary.org/obo/GO_0000724
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• DNA recombination
  http://purl.obolibrary.org/obo/GO_0006310
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• chromosome
  http://purl.obolibrary.org/obo/GO_0005694
• cell cycle
  http://purl.obolibrary.org/obo/GO_0007049
• nucleosome assembly
  http://purl.obolibrary.org/obo/GO_0006334
• nucleosome
  http://purl.obolibrary.org/obo/GO_0000786
• histone binding
  http://purl.obolibrary.org/obo/GO_0042393
• spermatogenesis
  http://purl.obolibrary.org/obo/GO_0007283
• damaged DNA binding
  http://purl.obolibrary.org/obo/GO_0003684
• condensed nuclear chromosome
  http://purl.obolibrary.org/obo/GO_0000794
• DNA damage checkpoint
  http://purl.obolibrary.org/obo/GO_0000077
• meiotic cell cycle
  http://purl.obolibrary.org/obo/GO_0051321
• generative cell nucleus
  http://purl.obolibrary.org/obo/GO_0048555
• XY body
  http://purl.obolibrary.org/obo/GO_0001741
• nuclear chromatin
  http://purl.obolibrary.org/obo/GO_0000790
• enzyme binding
  http://purl.obolibrary.org/obo/GO_0019899
• cellular response to DNA damage stimulus
  http://purl.obolibrary.org/obo/GO_0006974
• DNA repair
  http://purl.obolibrary.org/obo/GO_0006281

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map05322

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Systemic lupus erythematosus