CD02971

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD02971

CD02971

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Per1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• period homolog 1 (Drosophila)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• period circadian protein homolog 1
• circadian clock protein PERIOD 1
• period homolog 1 (Drosophila)
• circadian pacemaker protein Rigui

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• mPer1
• Per
• m-rigui

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/18626

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• period circadian clock 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:1098283

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_011065
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001159367

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000020893

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.7373

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=602260

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Michelle L. Gumz, et.al., Regulation of αENaC expression by the circadian clock protein Period 1 in mpkCCD(c14) cells., Biochimica et biophysica acta, 2010, 1799
  http://rdf.ncbi.nlm.nih.gov/pubmed/20868778
• http://rdf.ncbi.nlm.nih.gov/pubmed/20932939
• H. Tei, et.al., Circadian oscillation of a mammalian homologue of the Drosophila period gene., Nature, 1997, 389
  http://rdf.ncbi.nlm.nih.gov/pubmed/9333243
• Z S. Sun, et.al., RIGUI, a putative mammalian ortholog of the Drosophila period gene., Cell, 1997, 90
  http://rdf.ncbi.nlm.nih.gov/pubmed/9323128
• L P. Shearman, et.al., Two period homologs: circadian expression and photic regulation in the suprachiasmatic nuclei., Neuron, 1997, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/9427249
• Yool. Lee, et.al., Coactivation of the CLOCK-BMAL1 complex by CBP mediates resetting of the circadian clock., Journal of cell science, 2010, 123
  http://rdf.ncbi.nlm.nih.gov/pubmed/20930143
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Sarah M. Ward, et.al., The transcriptional repressor ID2 can interact with the canonical clock components CLOCK and BMAL1 and mediate inhibitory effects on mPer1 expression., The Journal of biological chemistry, 2010, 285
  http://rdf.ncbi.nlm.nih.gov/pubmed/20861012
• U. Albrecht, et.al., A differential response of two putative mammalian circadian regulators, mper1 and mper2, to light., Cell, 1997, 91
  http://rdf.ncbi.nlm.nih.gov/pubmed/9428527
• N. Ishida, et.al., Mouse hexamer repeat sequences homologous to the Drosophila 'period' gene., Nucleic acids research, 1988, 16
  http://rdf.ncbi.nlm.nih.gov/pubmed/3131739

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• RNA polymerase II core promoter proximal region sequence-specific DNA binding
  http://purl.obolibrary.org/obo/GO_0000978
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• signal transduction
  http://purl.obolibrary.org/obo/GO_0007165
• circadian regulation of gene expression
  http://purl.obolibrary.org/obo/GO_0032922
• E-box binding
  http://purl.obolibrary.org/obo/GO_0070888
• circadian rhythm
  http://purl.obolibrary.org/obo/GO_0007623
• negative regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0000122
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• rhythmic process
  http://purl.obolibrary.org/obo/GO_0048511
• signal transducer activity
  http://purl.obolibrary.org/obo/GO_0004871
• negative regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0045892
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04710
• http://www.genome.jp/dbget-bin/www_bget?map05168

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Circadian rhythm - mammal
• Herpes simplex infection