CD02978

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD02978

CD02978

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Pkp4

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• plakophilin 4

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• plakophilin 4
• armadillo-related protein
• plakophilin-4

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 9430019K17Rik
• p0071
• 5031422I09Rik
• Armrp

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/227937

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• plakophilin 4
  http://metadb.riken.jp/db/mgi_rdf/MGI:109281

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_175464
• https://www.ncbi.nlm.nih.gov/nuccore/NM_026361

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000026991

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.260938

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=604276

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Mark O. Collins, et.al., Proteomic analysis of in vivo phosphorylated synaptic proteins., The Journal of biological chemistry, 2005, 280
  http://rdf.ncbi.nlm.nih.gov/pubmed/15572359
• Michelle Jane. Burger, et.al., Expression analysis of delta-catenin and prostate-specific membrane antigen: their potential as diagnostic markers for prostate cancer., International journal of cancer, 2002, 100
  http://rdf.ncbi.nlm.nih.gov/pubmed/12115574
• M. Hatzfeld, et.al., Cloning and characterization of a new armadillo family member, p0071, associated with the junctional plaque: evidence for a subfamily of closely related proteins., Journal of cell science, 1996, 109 ( Pt 11)
  http://rdf.ncbi.nlm.nih.gov/pubmed/8937994
• Susan. Magdaleno, et.al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system., PLoS biology, 2006, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/16602821
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
• Richard P. Munton, et.al., Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations., Molecular & cellular proteomics : MCP, 2007, 6
  http://rdf.ncbi.nlm.nih.gov/pubmed/17114649
• Robnet T. Kerns, et.al., Ethanol-responsive brain region expression networks: implications for behavioral responses to acute ethanol in DBA/2J versus C57BL/6J mice., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2005, 25
  http://rdf.ncbi.nlm.nih.gov/pubmed/15745951
• Roland H. Friedel, et.al., EUCOMM--the European conditional mouse mutagenesis program., Briefings in functional genomics & proteomics, 2007, 6
  http://rdf.ncbi.nlm.nih.gov/pubmed/17967808
• R. Paffenholz, et.al., Identification and localization of a neurally expressed member of the plakoglobin/armadillo multigene family., Differentiation; research in biological diversity, 1997, 61
  http://rdf.ncbi.nlm.nih.gov/pubmed/9342840
• Jonathan C. Trinidad, et.al., Comprehensive identification of phosphorylation sites in postsynaptic density preparations., Molecular & cellular proteomics : MCP, 2006, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/16452087

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• positive regulation of cytokinesis
  http://purl.obolibrary.org/obo/GO_0032467
• plasma membrane
  http://purl.obolibrary.org/obo/GO_0005886
• spindle midzone
  http://purl.obolibrary.org/obo/GO_0051233
• cytoplasmic side of plasma membrane
  http://purl.obolibrary.org/obo/GO_0009898
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• mitotic spindle
  http://purl.obolibrary.org/obo/GO_0072686
• spindle pole
  http://purl.obolibrary.org/obo/GO_0000922
• cell junction
  http://purl.obolibrary.org/obo/GO_0030054
• cytoskeleton
  http://purl.obolibrary.org/obo/GO_0005856
• positive regulation of GTPase activity
  http://purl.obolibrary.org/obo/GO_0043547
• cell adhesion
  http://purl.obolibrary.org/obo/GO_0007155
• binding
  http://purl.obolibrary.org/obo/GO_0005488
• midbody
  http://purl.obolibrary.org/obo/GO_0030496

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName