Brain Transcriptome Database (BrainTx)
トランスクリプトームデータ
CD03264
http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD03264
CD03264(トランスクリプトームデータ)
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CD03264
トランスクリプトームデータ
遺伝子シンボル
http://metadb.riken.jp/db/BrainTx/geneSymbol
Otx2
遺伝子名
http://metadb.riken.jp/db/BrainTx/geneName
orthodenticle homolog 2 (Drosophila)
別名
http://metadb.riken.jp/db/BrainTx/alt_name
orthodenticle homolog 2 (Drosophila)
homeobox protein OTX2
別名略称
http://metadb.riken.jp/db/BrainTx/alt_symbol
E130306E05Rik
NCBI遺伝子
http://metadb.riken.jp/db/BrainTx/NCBIGene
https://www.ncbi.nlm.nih.gov/gene/18424
MGI遺伝子
http://metadb.riken.jp/db/BrainTx/mgiGene
orthodenticle homeobox 2
http://metadb.riken.jp/db/mgi_rdf/MGI:97451
BrainTx遺伝子
http://metadb.riken.jp/db/BrainTx/brainTxGene
脳発現画像
http://metadb.riken.jp/db/BrainTx/brainExpressionImage
時系列発現 (小脳)
http://metadb.riken.jp/db/BrainTx/brainExpression
脳発現特異性/組織別発現
http://metadb.riken.jp/db/BrainTx/brainSpecificity
BrainTx遺伝子カテゴリー
http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory
NCBI Accession Number
http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber
https://www.ncbi.nlm.nih.gov/nuccore/NM_144841
Ensembl 遺伝子
http://metadb.riken.jp/db/BrainTx/ensemblGene
http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000021848
UniGene 遺伝子
http://metadb.riken.jp/db/BrainTx/uniGene
https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.134516
OMIM ID
http://metadb.riken.jp/db/BrainTx/omim
https://www.omim.org/entry/603434?search=603434&highlight=600037
PubMed ID (PMID)
http://rdf.ncbi.nlm.nih.gov/pubmed/
Seiichi. Koike, et.al., Autotaxin is required for the cranial neural tube closure and establishment of the midbrain-hindbrain boundary during mouse development., Developmental dynamics : an official publication of the American Association of Anatomists, 2011, 240
http://rdf.ncbi.nlm.nih.gov/pubmed/21246658
Michela. Di Salvio, et.al., Otx2 controls neuron subtype identity in ventral tegmental area and antagonizes vulnerability to MPTP., Nature neuroscience, 2010, 13
http://rdf.ncbi.nlm.nih.gov/pubmed/21057506
S. Cereghini, et.al., Expression patterns of vHNF1 and HNF1 homeoproteins in early postimplantation embryos suggest distinct and sequential developmental roles., Development (Cambridge, England), 1992, 116
http://rdf.ncbi.nlm.nih.gov/pubmed/1363228
I. Matsuo, et.al., Mouse Otx2 functions in the formation and patterning of rostral head., Genes & development, 1995, 9
http://rdf.ncbi.nlm.nih.gov/pubmed/7590242
Jiang. Fu, et.al., Gpr177/mouse Wntless is essential for Wnt-mediated craniofacial and brain development., Developmental dynamics : an official publication of the American Association of Anatomists, 2011, 240
http://rdf.ncbi.nlm.nih.gov/pubmed/21246653
A. Simeone, et.al., Nested expression domains of four homeobox genes in developing rostral brain., Nature, 1992, 358
http://rdf.ncbi.nlm.nih.gov/pubmed/1353865
Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
S L. Ang, et.al., Positive and negative signals from mesoderm regulate the expression of mouse Otx2 in ectoderm explants., Development (Cambridge, England), 1994, 120
http://rdf.ncbi.nlm.nih.gov/pubmed/7607086
D. Acampora, et.al., Forebrain and midbrain regions are deleted in Otx2-/- mutants due to a defective anterior neuroectoderm specification during gastrulation., Development (Cambridge, England), 1995, 121
http://rdf.ncbi.nlm.nih.gov/pubmed/7588062
Cuiling. Li, et.al., Anterior visceral endoderm SMAD4 signaling specifies anterior embryonic patterning and head induction in mice., International journal of biological sciences, 2010, 6
http://rdf.ncbi.nlm.nih.gov/pubmed/20941375
Gene Ontology
http://metadb.riken.jp/db/BrainTx/golink
endoderm development
http://purl.obolibrary.org/obo/GO_0007492
cell fate specification
http://purl.obolibrary.org/obo/GO_0001708
regulation of transcription from RNA polymerase II promoter
http://purl.obolibrary.org/obo/GO_0006357
DNA binding
http://purl.obolibrary.org/obo/GO_0003677
neuron fate commitment
http://purl.obolibrary.org/obo/GO_0048663
forebrain development
http://purl.obolibrary.org/obo/GO_0030900
macromolecular complex assembly
http://purl.obolibrary.org/obo/GO_0065003
positive regulation of transcription from RNA polymerase II promoter
http://purl.obolibrary.org/obo/GO_0045944
cell fate commitment
http://purl.obolibrary.org/obo/GO_0045165
growth cone
http://purl.obolibrary.org/obo/GO_0030426
eye photoreceptor cell fate commitment
http://purl.obolibrary.org/obo/GO_0042706
cell differentiation
http://purl.obolibrary.org/obo/GO_0030154
protein heterodimerization activity
http://purl.obolibrary.org/obo/GO_0046982
axon guidance
http://purl.obolibrary.org/obo/GO_0007411
dorsal/ventral pattern formation
http://purl.obolibrary.org/obo/GO_0009953
central nervous system development
http://purl.obolibrary.org/obo/GO_0007417
macromolecular complex
http://purl.obolibrary.org/obo/GO_0032991
RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
http://purl.obolibrary.org/obo/GO_0001077
somite rostral/caudal axis specification
http://purl.obolibrary.org/obo/GO_0032525
nucleus
http://purl.obolibrary.org/obo/GO_0005634
inner ear morphogenesis
http://purl.obolibrary.org/obo/GO_0042472
anatomical structure development
http://purl.obolibrary.org/obo/GO_0048856
cytoplasm
http://purl.obolibrary.org/obo/GO_0005737
protein binding
http://purl.obolibrary.org/obo/GO_0005515
midbrain development
http://purl.obolibrary.org/obo/GO_0030901
neuron differentiation
http://purl.obolibrary.org/obo/GO_0030182
anterior/posterior pattern specification
http://purl.obolibrary.org/obo/GO_0009952
primitive streak formation
http://purl.obolibrary.org/obo/GO_0090009
InterPro ID
http://metadb.riken.jp/db/BrainTx/interPro
KEGG Pathway ID
http://metadb.riken.jp/db/BrainTx/keggPathwayID
KEGG Pathway 名称
http://metadb.riken.jp/db/BrainTx/keggPathwayName
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