CD03537

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD03537

CD03537

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Vcam1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• vascular cell adhesion molecule 1

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• vascular cell adhesion protein 1
• V-CAM 1
• vascular cell adhesion molecule 1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• CD106
• Vcam-1

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/22329

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• vascular cell adhesion molecule 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:98926

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_011693

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000027962

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.76649
• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.440909

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=192225

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• C. Hession, et.al., Cloning of murine and rat vascular cell adhesion molecule-1., Biochemical and biophysical research communications, 1992, 183
  http://rdf.ncbi.nlm.nih.gov/pubmed/1371918
• Jihang. Ju, et.al., Phosphorylation of p50 NF-kappaB at a single serine residue by DNA-dependent protein kinase is critical for VCAM-1 expression upon TNF treatment., The Journal of biological chemistry, 2010, 285
  http://rdf.ncbi.nlm.nih.gov/pubmed/20966071
• Tatiana. Ulyanova, et.al., Combinatorial and distinct roles of α₅ and α₄ integrins in stress erythropoiesis in mice., Blood, 2011, 117
  http://rdf.ncbi.nlm.nih.gov/pubmed/20956802
• R P. Wuthrich, Vascular cell adhesion molecule-1 (VCAM-1) expression in murine lupus nephritis., Kidney international, 1992, 42
  http://rdf.ncbi.nlm.nih.gov/pubmed/1280699
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• L D. Gerber, et.al., Phosphatidylinositol glycan (PI-G) anchored membrane proteins. Amino acid requirements adjacent to the site of cleavage and PI-G attachment in the COOH-terminal signal peptide., The Journal of biological chemistry, 1992, 267
  http://rdf.ncbi.nlm.nih.gov/pubmed/1601882
• Maho. Shibata, et.al., The mouse KRAB zinc-finger protein CHATO is required in embryonic-derived tissues to control yolk sac and placenta morphogenesis., Developmental biology, 2011, 349
  http://rdf.ncbi.nlm.nih.gov/pubmed/21094155
• Boris. Calderon, et.al., Entry of diabetogenic T cells into islets induces changes that lead to amplification of the cellular response., Proceedings of the National Academy of Sciences of the United States of America, 2011, 108
  http://rdf.ncbi.nlm.nih.gov/pubmed/21220309
• K. Miyake, et.al., A VCAM-like adhesion molecule on murine bone marrow stromal cells mediates binding of lymphocyte precursors in culture., The Journal of cell biology, 1991, 114
  http://rdf.ncbi.nlm.nih.gov/pubmed/1713592
• C. Hession, et.al., Cloning of an alternate form of vascular cell adhesion molecule-1 (VCAM1)., The Journal of biological chemistry, 1991, 266
  http://rdf.ncbi.nlm.nih.gov/pubmed/1707873

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• integrin binding
  http://purl.obolibrary.org/obo/GO_0005178
• filopodium
  http://purl.obolibrary.org/obo/GO_0030175
• cell surface
  http://purl.obolibrary.org/obo/GO_0009986
• leukocyte cell-cell adhesion
  http://purl.obolibrary.org/obo/GO_0007159
• podosome
  http://purl.obolibrary.org/obo/GO_0002102
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• embryonic placenta morphogenesis
  http://purl.obolibrary.org/obo/GO_0060669
• cell-cell adhesion
  http://purl.obolibrary.org/obo/GO_0098609
• heart development
  http://purl.obolibrary.org/obo/GO_0007507
• cell adhesion molecule binding
  http://purl.obolibrary.org/obo/GO_0050839
• external side of plasma membrane
  http://purl.obolibrary.org/obo/GO_0009897
• apical part of cell
  http://purl.obolibrary.org/obo/GO_0045177
• positive regulation of T cell proliferation
  http://purl.obolibrary.org/obo/GO_0042102
• alpha9-beta1 integrin-vascular cell adhesion molecule-1 complex
  http://purl.obolibrary.org/obo/GO_0071065
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021
• visceral serous pericardium development
  http://purl.obolibrary.org/obo/GO_0061032
• cell adhesion
  http://purl.obolibrary.org/obo/GO_0007155
• plasma membrane
  http://purl.obolibrary.org/obo/GO_0005886
• extracellular space
  http://purl.obolibrary.org/obo/GO_0005615
• sarcolemma
  http://purl.obolibrary.org/obo/GO_0042383
• interspecies interaction between organisms
  http://purl.obolibrary.org/obo/GO_0044419
• chorio-allantoic fusion
  http://purl.obolibrary.org/obo/GO_0060710
• cellular response to glucose stimulus
  http://purl.obolibrary.org/obo/GO_0071333
• anchored component of membrane
  http://purl.obolibrary.org/obo/GO_0031225
• cell cortex
  http://purl.obolibrary.org/obo/GO_0005938
• microvillus
  http://purl.obolibrary.org/obo/GO_0005902
• cell periphery
  http://purl.obolibrary.org/obo/GO_0071944

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map05166
• http://www.genome.jp/dbget-bin/www_bget?map05143
• http://www.genome.jp/dbget-bin/www_bget?map04514
• http://www.genome.jp/dbget-bin/www_bget?map05144
• http://www.genome.jp/dbget-bin/www_bget?map04670

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Malaria
• African trypanosomiasis
• Leukocyte transendothelial migration
• Cell adhesion molecules (CAMs)
• HTLV-I infection