CD03541

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD03541

CD03541

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Casp6

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• caspase 6

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• CASP-6
• apoptotic protease Mch-2
• caspase-6
• caspase 6

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• mCASP-6
• Mch2

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/12368

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• caspase 6
  http://metadb.riken.jp/db/mgi_rdf/MGI:1312921

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_009811

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000027997

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.281379

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=601532

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Emilie. Arnault, et.al., Review: Lamin A/C, caspase-6, and chromatin configuration during meiosis resumption in the mouse oocyte., Reproductive sciences (Thousand Oaks, Calif.), 2010, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/20130288
• M. Van de Craen, et.al., Characterization of seven murine caspase family members., FEBS letters, 1997, 403
  http://rdf.ncbi.nlm.nih.gov/pubmed/9038361
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Bing Z. Carter, et.al., Simultaneous activation of p53 and inhibition of XIAP enhance the activation of apoptosis signaling pathways in AML., Blood, 2010, 115
  http://rdf.ncbi.nlm.nih.gov/pubmed/19897582
• Teppei. Ikeda, et.al., Expression of caspase family and muscle- and apoptosis-specific genes during skeletal myogenesis in mouse embryo., The Journal of veterinary medical science, 2009, 71
  http://rdf.ncbi.nlm.nih.gov/pubmed/19801895
• T S. Zheng, et.al., Caspase knockouts: matters of life and death., Cell death and differentiation, 1999, 6
  http://rdf.ncbi.nlm.nih.gov/pubmed/10578172
• K A. Roth, et.al., Epistatic and independent functions of caspase-3 and Bcl-X(L) in developmental programmed cell death., Proceedings of the National Academy of Sciences of the United States of America, 2000, 97
  http://rdf.ncbi.nlm.nih.gov/pubmed/10618441
• T S. Zheng, et.al., Divinations and surprises: genetic analysis of caspase function in mice., Experimental cell research, 2000, 256
  http://rdf.ncbi.nlm.nih.gov/pubmed/10739653
• Hiroshi. Kobayashi, et.al., Neutrophils activate alveolar macrophages by producing caspase-6-mediated cleavage of IL-1 receptor-associated kinase-M., Journal of immunology (Baltimore, Md. : 1950), 2011, 186
  http://rdf.ncbi.nlm.nih.gov/pubmed/21098228
• G E. Exley, et.al., Expression of caspase and BCL-2 apoptotic family members in mouse preimplantation embryos., Biology of reproduction, 1999, 61
  http://rdf.ncbi.nlm.nih.gov/pubmed/10377054

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• metabolic process
  http://purl.obolibrary.org/obo/GO_0008152
• cysteine-type peptidase activity
  http://purl.obolibrary.org/obo/GO_0008234
• acute inflammatory response to non-antigenic stimulus
  http://purl.obolibrary.org/obo/GO_0002525
• regulation of apoptotic process
  http://purl.obolibrary.org/obo/GO_0042981
• cysteine-type endopeptidase activity
  http://purl.obolibrary.org/obo/GO_0004197
• response to iron ion
  http://purl.obolibrary.org/obo/GO_0010039
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• endopeptidase activity
  http://purl.obolibrary.org/obo/GO_0004175
• peptidase activity
  http://purl.obolibrary.org/obo/GO_0008233
• hydrolase activity
  http://purl.obolibrary.org/obo/GO_0016787
• positive regulation of retinal cell programmed cell death
  http://purl.obolibrary.org/obo/GO_0046670
• positive regulation of neuron apoptotic process
  http://purl.obolibrary.org/obo/GO_0043525
• positive regulation of apoptotic process
  http://purl.obolibrary.org/obo/GO_0043065
• response to glucose
  http://purl.obolibrary.org/obo/GO_0009749
• apoptotic process
  http://purl.obolibrary.org/obo/GO_0006915
• response to hydrogen peroxide
  http://purl.obolibrary.org/obo/GO_0042542
• cytosol
  http://purl.obolibrary.org/obo/GO_0005829
• positive regulation of compound eye retinal cell programmed cell death
  http://purl.obolibrary.org/obo/GO_0046672
• proteolysis
  http://purl.obolibrary.org/obo/GO_0006508
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• response to cytokine
  http://purl.obolibrary.org/obo/GO_0034097
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04210

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Apoptosis