CD03805

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD03805

CD03805

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Acta2

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• actin, alpha 2, smooth muscle, aorta

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• actin, alpha, vascular smooth muscle
• alpha-actin-2
• actin, alpha 2, smooth muscle, aorta
• actin, aortic smooth muscle

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• alphaSMA
• SMalphaA
• a-SMA
• 0610041G09Rik
• Actvs

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/11475

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• actin, alpha 2, smooth muscle, aorta
  http://metadb.riken.jp/db/mgi_rdf/MGI:87909

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_007392

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000035783

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.213025

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=102620
• https://www.omim.org/entry/603434?search=603434&highlight=102545

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Youngsin. Jung, et.al., β8 integrin and band 4.1B cooperatively regulate morphogenesis of the embryonic heart., Developmental dynamics : an official publication of the American Association of Anatomists, 2011, 240
  http://rdf.ncbi.nlm.nih.gov/pubmed/21181944
• Frédéric G. Sala, et.al., FGF10 controls the patterning of the tracheal cartilage rings via Shh., Development (Cambridge, England), 2011, 138
  http://rdf.ncbi.nlm.nih.gov/pubmed/21148187
• T A. Rhyner, et.al., Isolation of cDNAs from a mouse astroglial cell line by a subtracted cDNA library., Journal of neuroscience research, 1990, 27
  http://rdf.ncbi.nlm.nih.gov/pubmed/1701491
• B H. Min, et.al., The 5'-flanking region of the mouse vascular smooth muscle alpha-actin gene contains evolutionarily conserved sequence motifs within a functional promoter., The Journal of biological chemistry, 1990, 265
  http://rdf.ncbi.nlm.nih.gov/pubmed/2398068
• Helen. Waller-Evans, et.al., The orphan adhesion-GPCR GPR126 is required for embryonic development in the mouse., PloS one, 2010, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/21124978
• A. Blanchart, et.al., Peripheral contributions to olfactory bulb cell populations (migrations towards the olfactory bulb)., Glia, 2011, 59
  http://rdf.ncbi.nlm.nih.gov/pubmed/21125652
• D N. Foster, et.al., Positive and negative cis-acting regulatory elements mediate expression of the mouse vascular smooth muscle alpha-actin gene., The Journal of biological chemistry, 1992, 267
  http://rdf.ncbi.nlm.nih.gov/pubmed/1601869
• S P. Schiffer, et.al., Organic aciduria and butyryl CoA dehydrogenase deficiency in BALB/cByJ mice., Biochemical genetics, 1989, 27
  http://rdf.ncbi.nlm.nih.gov/pubmed/2712823
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• D E. Harris, et.al., Nucleotide sequences of the rabbit alpha-smooth-muscle and beta-non-muscle actin mRNAs., Gene, 1992, 112
  http://rdf.ncbi.nlm.nih.gov/pubmed/1555776

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• ATP binding
  http://purl.obolibrary.org/obo/GO_0005524
• cytoskeleton
  http://purl.obolibrary.org/obo/GO_0005856
• vascular smooth muscle contraction
  http://purl.obolibrary.org/obo/GO_0014829
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• actin cytoskeleton
  http://purl.obolibrary.org/obo/GO_0015629
• nucleotide binding
  http://purl.obolibrary.org/obo/GO_0000166
• smooth muscle contractile fiber
  http://purl.obolibrary.org/obo/GO_0030485
• regulation of blood pressure
  http://purl.obolibrary.org/obo/GO_0008217

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04270

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Vascular smooth muscle contraction