CD04413

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD04413

CD04413

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Nudt21

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• nudix (nucleoside diphosphate linked moiety X)-type motif 21

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• nudix (nucleoside diphosphate linked moiety X)-type motif 21
• cleavage and polyadenylation specific factor 5, 25 kD subunit
• nucleoside diphosphate-linked moiety X motif 21
• nudix motif 21
• cleavage and polyadenylation specificity factor subunit 5

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 3110048P04Rik
• AU014860
• 25kDa
• AW549947
• 5730530J16Rik
• Cpsf5

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/68219

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• nudix (nucleoside diphosphate linked moiety X)-type motif 21
  http://metadb.riken.jp/db/mgi_rdf/MGI:1915469

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_026623

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000031754

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.354445
• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.432611

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=604978

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Adrienne E. McKee, et.al., A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain., BMC developmental biology, 2005, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/16033648
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Susan. Magdaleno, et.al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system., PLoS biology, 2006, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/16602821
• Roland H. Friedel, et.al., EUCOMM--the European conditional mouse mutagenesis program., Briefings in functional genomics & proteomics, 2007, 6
  http://rdf.ncbi.nlm.nih.gov/pubmed/17967808
• Becky L. Sartini, et.al., Pre-messenger RNA cleavage factor I (CFIm): potential role in alternative polyadenylation during spermatogenesis., Biology of reproduction, 2008, 78
  http://rdf.ncbi.nlm.nih.gov/pubmed/18032416
• Axel. Visel, et.al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo., Nucleic acids research, 2004, 32
  http://rdf.ncbi.nlm.nih.gov/pubmed/14681479

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• hydrolase activity
  http://purl.obolibrary.org/obo/GO_0016787
• AU-rich element binding
  http://purl.obolibrary.org/obo/GO_0017091
• protein homodimerization activity
  http://purl.obolibrary.org/obo/GO_0042803
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• centrosome
  http://purl.obolibrary.org/obo/GO_0005813
• mRNA polyadenylation
  http://purl.obolibrary.org/obo/GO_0006378
• paraspeckles
  http://purl.obolibrary.org/obo/GO_0042382
• RNA binding
  http://purl.obolibrary.org/obo/GO_0003723
• histone deacetylase binding
  http://purl.obolibrary.org/obo/GO_0042826
• mRNA cleavage
  http://purl.obolibrary.org/obo/GO_0006379
• mRNA processing
  http://purl.obolibrary.org/obo/GO_0006397
• mRNA cleavage factor complex
  http://purl.obolibrary.org/obo/GO_0005849
• protein tetramerization
  http://purl.obolibrary.org/obo/GO_0051262
• mRNA binding
  http://purl.obolibrary.org/obo/GO_0003729
• metabolic process
  http://purl.obolibrary.org/obo/GO_0008152

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map03015

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• mRNA surveillance pathway