CD05278

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD05278

CD05278

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Sema3f

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
• semaphorin-3F
• semaphorin IV

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Sema4
• Semak
• Sema IV

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/20350

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
  http://metadb.riken.jp/db/mgi_rdf/MGI:1096347

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_011349

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000034684

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.12903

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=601124

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• D. Jiménez, et.al., Evidence for intrinsic development of olfactory structures in Pax-6 mutant mice., The Journal of comparative neurology, 2000, 428
  http://rdf.ncbi.nlm.nih.gov/pubmed/11074448
• A. Chédotal, et.al., Semaphorins III and IV repel hippocampal axons via two distinct receptors., Development (Cambridge, England), 1998, 125
  http://rdf.ncbi.nlm.nih.gov/pubmed/9753685
• F. Eckhardt, et.al., Cloning and expression pattern of a murine semaphorin homologous to H-sema IV., Neuroreport, 1998, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/9875739
• S. Tajbakhsh, et.al., Differential activation of Myf5 and MyoD by different Wnts in explants of mouse paraxial mesoderm and the later activation of myogenesis in the absence of Myf5., Development (Cambridge, England), 1998, 125
  http://rdf.ncbi.nlm.nih.gov/pubmed/9753670
• Anna. Cariboni, et.al., Defective gonadotropin-releasing hormone neuron migration in mice lacking SEMA3A signalling through NRP1 and NRP2: implications for the aetiology of hypogonadotropic hypogonadism., Human molecular genetics, 2011, 20
  http://rdf.ncbi.nlm.nih.gov/pubmed/21059704
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• R J. Giger, et.al., Neuropilin-2 is required in vivo for selective axon guidance responses to secreted semaphorins., Neuron, 2000, 25
  http://rdf.ncbi.nlm.nih.gov/pubmed/10707970
• Tracy S. Tran, et.al., Secreted semaphorins control spine distribution and morphogenesis in the postnatal CNS., Nature, 2009, 462
  http://rdf.ncbi.nlm.nih.gov/pubmed/20010807
• Haruki. Takeuchi, et.al., Sequential arrival and graded secretion of Sema3F by olfactory neuron axons specify map topography at the bulb., Cell, 2010, 141
  http://rdf.ncbi.nlm.nih.gov/pubmed/20550939
• Ikuo. Matsuda, et.al., Development of the somatosensory cortex, the cerebellum, and the main olfactory system in Semaphorin 3F knockout mice., Neuroscience research, 2010, 66
  http://rdf.ncbi.nlm.nih.gov/pubmed/20006658

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• cargo receptor activity
  http://purl.obolibrary.org/obo/GO_0038024
• neural crest cell migration
  http://purl.obolibrary.org/obo/GO_0001755
• axon guidance
  http://purl.obolibrary.org/obo/GO_0007411
• chemorepellent activity
  http://purl.obolibrary.org/obo/GO_0045499
• negative regulation of axon extension involved in axon guidance
  http://purl.obolibrary.org/obo/GO_0048843
• signaling receptor activity
  http://purl.obolibrary.org/obo/GO_0038023
• negative chemotaxis
  http://purl.obolibrary.org/obo/GO_0050919
• extracellular region
  http://purl.obolibrary.org/obo/GO_0005576

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04360

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Axon guidance