CD06211

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD06211

CD06211

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Lum

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• lumican

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• lumican
• keratan sulfate proteoglycan lumican
• KSPG lumican

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Ldc
• SLRR2D

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/17022

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• lumican
  http://metadb.riken.jp/db/mgi_rdf/MGI:109347

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_008524

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000036446

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.18888

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=600616

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Eric C. Carlson, et.al., Regulation of corneal inflammation by neutrophil-dependent cleavage of keratan sulfate proteoglycans as a model for breakdown of the chemokine gradient., Journal of leukocyte biology, 2010, 88
  http://rdf.ncbi.nlm.nih.gov/pubmed/20495072
• J R. Dunlevy, et.al., Cloning and chromosomal localization of mouse keratocan, a corneal keratan sulfate proteoglycan., Mammalian genome : official journal of the International Mammalian Genome Society, 1998, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/9530631
• S. Chakravarti, et.al., Localization of mouse lumican (keratan sulfate proteoglycan) to distal chromosome 10., Mammalian genome : official journal of the International Mammalian Genome Society, 1995, 6
  http://rdf.ncbi.nlm.nih.gov/pubmed/7626890
• J. Löster, et.al., Cat3vl and Cat3vao cataract mutations on mouse chromosome 10: phenotypic characterization, linkage studies and analysis of candidate genes., Molecular & general genetics : MGG, 1997, 257
  http://rdf.ncbi.nlm.nih.gov/pubmed/9439574
• Shoujun. Chen, et.al., Fibromodulin regulates collagen fibrillogenesis during peripheral corneal development., Developmental dynamics : an official publication of the American Association of Anatomists, 2010, 239
  http://rdf.ncbi.nlm.nih.gov/pubmed/20108350
• S. Ying, et.al., Characterization and expression of the mouse lumican gene., The Journal of biological chemistry, 1997, 272
  http://rdf.ncbi.nlm.nih.gov/pubmed/9374517
• Yasuhito. Hayashi, et.al., Lumican is required for neutrophil extravasation following corneal injury and wound healing., Journal of cell science, 2010, 123
  http://rdf.ncbi.nlm.nih.gov/pubmed/20699360
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Seakwoo. Lee, et.al., Extracellular matrix lumican deposited on the surface of neutrophils promotes migration by binding to beta2 integrin., The Journal of biological chemistry, 2009, 284
  http://rdf.ncbi.nlm.nih.gov/pubmed/19531489
• J L. Funderburgh, et.al., Sequence, molecular properties, and chromosomal mapping of mouse lumican., Investigative ophthalmology & visual science, 1995, 36
  http://rdf.ncbi.nlm.nih.gov/pubmed/7558724

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• proteinaceous extracellular matrix
  http://purl.obolibrary.org/obo/GO_0005578
• extracellular space
  http://purl.obolibrary.org/obo/GO_0005615
• extracellular region
  http://purl.obolibrary.org/obo/GO_0005576
• collagen binding
  http://purl.obolibrary.org/obo/GO_0005518

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName