CD06452

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD06452

CD06452

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Suv420h2

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• suppressor of variegation 4-20 homolog 2 (Drosophila)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• histone-lysine N-methyltransferase SUV420H2
• su(var)4-20 homolog 2
• suppressor of variegation 4-20 homolog 2 (Drosophila)

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• KMT5C
• BC024816
• Suv4-20h2

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/232811

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• lysine methyltransferase 5C
  http://metadb.riken.jp/db/mgi_rdf/MGI:2385262

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_146177
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001115018

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000059851

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.247844

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=613198

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Gunnar. Schotta, et.al., A silencing pathway to induce H3-K9 and H4-K20 trimethylation at constitutive heterochromatin., Genes & development, 2004, 18
  http://rdf.ncbi.nlm.nih.gov/pubmed/15145825
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• C David. Allis, et.al., New nomenclature for chromatin-modifying enzymes., Cell, 2007, 131
  http://rdf.ncbi.nlm.nih.gov/pubmed/18022353
• Roberta. Benetti, et.al., Suv4-20h deficiency results in telomere elongation and derepression of telomere recombination., The Journal of cell biology, 2007, 178
  http://rdf.ncbi.nlm.nih.gov/pubmed/17846168
• Cristina. García-Frigola, et.al., A collection of cDNAs enriched in upper cortical layers of the embryonic mouse brain., Brain research. Molecular brain research, 2004, 122
  http://rdf.ncbi.nlm.nih.gov/pubmed/15010206
• Gunnar. Schotta, et.al., A chromatin-wide transition to H4K20 monomethylation impairs genome integrity and programmed DNA rearrangements in the mouse., Genes & development, 2008, 22
  http://rdf.ncbi.nlm.nih.gov/pubmed/18676810
• Christian E. Isaac, et.al., The retinoblastoma protein regulates pericentric heterochromatin., Molecular and cellular biology, 2006, 26
  http://rdf.ncbi.nlm.nih.gov/pubmed/16612004
• Susana. Gonzalo, et.al., Role of the RB1 family in stabilizing histone methylation at constitutive heterochromatin., Nature cell biology, 2005, 7
  http://rdf.ncbi.nlm.nih.gov/pubmed/15750587
• Maëlle. Pannetier, et.al., PR-SET7 and SUV4-20H regulate H4 lysine-20 methylation at imprinting control regions in the mouse., EMBO reports, 2008, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/18724273

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• chromosome
  http://purl.obolibrary.org/obo/GO_0005694
• histone lysine methylation
  http://purl.obolibrary.org/obo/GO_0034968
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• peptidyl-lysine methylation
  http://purl.obolibrary.org/obo/GO_0018022
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• methyltransferase activity
  http://purl.obolibrary.org/obo/GO_0008168
• transferase activity
  http://purl.obolibrary.org/obo/GO_0016740
• histone methyltransferase activity (H4-K20 specific)
  http://purl.obolibrary.org/obo/GO_0042799
• methylation
  http://purl.obolibrary.org/obo/GO_0032259
• histone methylation
  http://purl.obolibrary.org/obo/GO_0016571
• chromatin organization
  http://purl.obolibrary.org/obo/GO_0006325
• condensed nuclear chromosome, centromeric region
  http://purl.obolibrary.org/obo/GO_0000780
• covalent chromatin modification
  http://purl.obolibrary.org/obo/GO_0016569
• histone-lysine N-methyltransferase activity
  http://purl.obolibrary.org/obo/GO_0018024

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00310

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Lysine degradation