CD06745

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD06745

CD06745

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Cald1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• caldesmon 1

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• caldesmon 1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 4833423D12Rik
• AV071549
• C920027I18Rik
• AW536160
• AI195384

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/109624

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• caldesmon 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:88250

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_145575

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000029761

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.482600
• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.308134

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=114213

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• N G. Copeland, et.al., A genetic linkage map of the mouse: current applications and future prospects., Science (New York, N.Y.), 1993, 262
  http://rdf.ncbi.nlm.nih.gov/pubmed/8211130
• Chinmay M. Trivedi, et.al., Hopx and Hdac2 interact to modulate Gata4 acetylation and embryonic cardiac myocyte proliferation., Developmental cell, 2010, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/20833366
• H. Yamada, et.al., AT2 receptor and vascular smooth muscle cell differentiation in vascular development., Hypertension (Dallas, Tex. : 1979), 1999, 33
  http://rdf.ncbi.nlm.nih.gov/pubmed/10373225
• Ning. Liu, et.al., microRNA-133a regulates cardiomyocyte proliferation and suppresses smooth muscle gene expression in the heart., Genes & development, 2008, 22
  http://rdf.ncbi.nlm.nih.gov/pubmed/19015276
• Guoji. Guo, et.al., Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst., Developmental cell, 2010, 18
  http://rdf.ncbi.nlm.nih.gov/pubmed/20412781
• Utpal K. Mukhopadhyay, et.al., p53 suppresses Src-induced podosome and rosette formation and cellular invasiveness through the upregulation of caldesmon., Molecular and cellular biology, 2009, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/19349302
• A M. Ryan, et.al., Chromosomal assignment of six muscle-specific genes in cattle., Animal genetics, 1997, 28
  http://rdf.ncbi.nlm.nih.gov/pubmed/9172305
• M. Bergwerff, et.al., Unique vascular morphology of the fourth aortic arches: possible implications for pathogenesis of type-B aortic arch interruption and anomalous right subclavian artery., Cardiovascular research, 1999, 44
  http://rdf.ncbi.nlm.nih.gov/pubmed/10615402
• Thomas. Boettger, et.al., Acquisition of the contractile phenotype by murine arterial smooth muscle cells depends on the Mir143/145 gene cluster., The Journal of clinical investigation, 2009, 119
  http://rdf.ncbi.nlm.nih.gov/pubmed/19690389
• G. Walker, et.al., The role of caldesmon in the regulation of receptor capping in mouse T-lymphoma cell., The Journal of biological chemistry, 1989, 264
  http://rdf.ncbi.nlm.nih.gov/pubmed/2909534

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• membrane fraction
  http://purl.obolibrary.org/obo/GO_0005624
• actin filament bundle assembly
  http://purl.obolibrary.org/obo/GO_0051017
• actin cap
  http://purl.obolibrary.org/obo/GO_0030478
• dendritic spine
  http://purl.obolibrary.org/obo/GO_0043197
• postsynaptic density
  http://purl.obolibrary.org/obo/GO_0014069
• regulation of smooth muscle contraction
  http://purl.obolibrary.org/obo/GO_0006940
• neuronal cell body
  http://purl.obolibrary.org/obo/GO_0043025
• positive regulation of protein binding
  http://purl.obolibrary.org/obo/GO_0032092
• actin cytoskeleton
  http://purl.obolibrary.org/obo/GO_0015629
• plasma membrane
  http://purl.obolibrary.org/obo/GO_0005886
• actin binding
  http://purl.obolibrary.org/obo/GO_0003779
• dendrite
  http://purl.obolibrary.org/obo/GO_0030425
• actin filament
  http://purl.obolibrary.org/obo/GO_0005884

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04270

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Vascular smooth muscle contraction