CD06884

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD06884

CD06884

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Foxj1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• forkhead box J1

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• forkhead box protein J1
• forkhead box J1
• HNF-3/forkhead homolog 4
• forkhead-related protein FKHL13
• hepatocyte nuclear factor 3 forkhead homolog 4

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• HFH-4
• Hfh4
• FKHL-13

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/15223

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• forkhead box J1
  http://metadb.riken.jp/db/mgi_rdf/MGI:1347474

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_008240

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000034227

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.378938

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=602291

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• B P. Hackett, et.al., Primary structure of hepatocyte nuclear factor/forkhead homologue 4 and characterization of gene expression in the developing respiratory and reproductive epithelium., Proceedings of the National Academy of Sciences of the United States of America, 1995, 92
  http://rdf.ncbi.nlm.nih.gov/pubmed/7753791
• D E. Clevidence, et.al., Identification of nine tissue-specific transcription factors of the hepatocyte nuclear factor 3/forkhead DNA-binding-domain family., Proceedings of the National Academy of Sciences of the United States of America, 1993, 90
  http://rdf.ncbi.nlm.nih.gov/pubmed/7683413
• H. Ye, et.al., Hepatocyte nuclear factor 3/fork head homolog 11 is expressed in proliferating epithelial and mesenchymal cells of embryonic and adult tissues., Molecular and cellular biology, 1997, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/9032290
• Jeffrey D. Lee, et.al., Left-right patterning in the mouse requires Epb4.1l5-dependent morphogenesis of the node and midline., Developmental biology, 2010, 346
  http://rdf.ncbi.nlm.nih.gov/pubmed/20678497
• D E. Clevidence, et.al., Members of the HNF-3/forkhead family of transcription factors exhibit distinct cellular expression patterns in lung and regulate the surfactant protein B promoter., Developmental biology, 1994, 166
  http://rdf.ncbi.nlm.nih.gov/pubmed/7958446
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• K B. Avraham, et.al., Murine chromosomal location of eight members of the hepatocyte nuclear factor 3/fork head winged helix family of transcription factors., Genomics, 1995, 25
  http://rdf.ncbi.nlm.nih.gov/pubmed/7789972
• Catarina. Cruz, et.al., Foxj1 regulates floor plate cilia architecture and modifies the response of cells to sonic hedgehog signalling., Development (Cambridge, England), 2010, 137
  http://rdf.ncbi.nlm.nih.gov/pubmed/21098568
• Damon. Love, et.al., Altered lung morphogenesis, epithelial cell differentiation and mechanics in mice deficient in the Wnt/β-catenin antagonist Chibby., PloS one, 2010, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/21049041
• Elizabeth Anne. Kiselak, et.al., Transcriptional regulation of an axonemal central apparatus gene, sperm-associated antigen 6, by a SRY-related high mobility group transcription factor, S-SOX5., The Journal of biological chemistry, 2010, 285
  http://rdf.ncbi.nlm.nih.gov/pubmed/20668334

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• leukocyte migration
  http://purl.obolibrary.org/obo/GO_0050900
• cilium morphogenesis
  http://purl.obolibrary.org/obo/GO_0060271
• regulation of epithelial cell differentiation
  http://purl.obolibrary.org/obo/GO_0030856
• humoral immune response
  http://purl.obolibrary.org/obo/GO_0006959
• negative regulation of B cell activation
  http://purl.obolibrary.org/obo/GO_0050869
• heart looping
  http://purl.obolibrary.org/obo/GO_0001947
• left/right pattern formation
  http://purl.obolibrary.org/obo/GO_0060972
• regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0006357
• negative regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0000122
• establishment of apical/basal cell polarity
  http://purl.obolibrary.org/obo/GO_0035089
• negative regulation of T cell proliferation
  http://purl.obolibrary.org/obo/GO_0042130
• epithelial cell differentiation
  http://purl.obolibrary.org/obo/GO_0030855
• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677
• negative regulation of humoral immune response mediated by circulating immunoglobulin
  http://purl.obolibrary.org/obo/GO_0002924
• positive regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0045944
• sequence-specific DNA binding
  http://purl.obolibrary.org/obo/GO_0043565
• RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
  http://purl.obolibrary.org/obo/GO_0003705
• negative regulation of NF-kappaB transcription factor activity
  http://purl.obolibrary.org/obo/GO_0032088
• negative regulation of germinal center formation
  http://purl.obolibrary.org/obo/GO_0002635
• negative regulation of interleukin-6 biosynthetic process
  http://purl.obolibrary.org/obo/GO_0045409
• transcription factor complex
  http://purl.obolibrary.org/obo/GO_0005667
• transcription factor binding
  http://purl.obolibrary.org/obo/GO_0008134
• DNA binding, bending
  http://purl.obolibrary.org/obo/GO_0008301
• negative regulation of T cell differentiation in thymus
  http://purl.obolibrary.org/obo/GO_0033085
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• positive regulation of central B cell tolerance induction
  http://purl.obolibrary.org/obo/GO_0002897
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• sequence-specific DNA binding transcription factor activity
  http://purl.obolibrary.org/obo/GO_0003700
• central tolerance induction
  http://purl.obolibrary.org/obo/GO_0002508
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• actin cytoskeleton organization
  http://purl.obolibrary.org/obo/GO_0030036
• lung development
  http://purl.obolibrary.org/obo/GO_0030324
• protein domain specific binding
  http://purl.obolibrary.org/obo/GO_0019904
• double-stranded DNA binding
  http://purl.obolibrary.org/obo/GO_0003690
• activation of GTPase activity
  http://purl.obolibrary.org/obo/GO_0090630

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName