CD07071

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD07071

CD07071

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Eomes

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• eomesodermin homolog (Xenopus laevis)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• eomesodermin homolog
• eomesodermin homolog (Xenopus laevis)
• T-box brain protein 2
• T-brain-2

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• TBR-2
• Tbr2
• C77258

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/13813

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• eomesodermin
  http://metadb.riken.jp/db/mgi_rdf/MGI:1201683

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_010136
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001164789

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000032446

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.200692

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=604615

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• B G. Ciruna, et.al., Expression of the T-box gene Eomesodermin during early mouse development., Mechanisms of development, 1999, 81
  http://rdf.ncbi.nlm.nih.gov/pubmed/10330500
• Yayoi. Shikata, et.al., Ptch1-mediated dosage-dependent action of Shh signaling regulates neural progenitor development at late gestational stages., Developmental biology, 2011, 349
  http://rdf.ncbi.nlm.nih.gov/pubmed/20969845
• Adrian Kee Keong. Teo, et.al., Pluripotency factors regulate definitive endoderm specification through eomesodermin., Genes & development, 2011, 25
  http://rdf.ncbi.nlm.nih.gov/pubmed/21245162
• S N. Hancock, et.al., Mapping and expression analysis of the mouse ortholog of Xenopus Eomesodermin., Mechanisms of development, 1999, 81
  http://rdf.ncbi.nlm.nih.gov/pubmed/10330501
• S. Wattler, et.al., A combined analysis of genomic and primary protein structure defines the phylogenetic relationship of new members if the T-box family., Genomics, 1998, 48
  http://rdf.ncbi.nlm.nih.gov/pubmed/9503012
• Joerg D. Hoeck, et.al., Fbw7 controls neural stem cell differentiation and progenitor apoptosis via Notch and c-Jun., Nature neuroscience, 2010, 13
  http://rdf.ncbi.nlm.nih.gov/pubmed/20935640
• S D. Dib-Hajj, et.al., Coding sequence, genomic organization, and conserved chromosomal localization of the mouse gene Scn11a encoding the sodium channel NaN., Genomics, 1999, 59
  http://rdf.ncbi.nlm.nih.gov/pubmed/10444332
• Chai-An. Mao, et.al., Neuronal transcriptional repressor REST suppresses an Atoh7-independent program for initiating retinal ganglion cell development., Developmental biology, 2011, 349
  http://rdf.ncbi.nlm.nih.gov/pubmed/20969844
• Ichiko. Kinjyo, et.al., Cutting edge: Lymphoproliferation caused by Fas deficiency is dependent on the transcription factor eomesodermin., Journal of immunology (Baltimore, Md. : 1950), 2010, 185
  http://rdf.ncbi.nlm.nih.gov/pubmed/21076068
• N. Kimura, et.al., A novel mammalian T-box-containing gene, Tbr2, expressed in mouse developing brain., Brain research. Developmental brain research, 1999, 115
  http://rdf.ncbi.nlm.nih.gov/pubmed/10407135

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0006357
• brain development
  http://purl.obolibrary.org/obo/GO_0007420
• intracellular
  http://purl.obolibrary.org/obo/GO_0005622
• cell differentiation involved in embryonic placenta development
  http://purl.obolibrary.org/obo/GO_0060706
• mesodermal to mesenchymal transition involved in gastrulation
  http://purl.obolibrary.org/obo/GO_0060809
• endoderm formation
  http://purl.obolibrary.org/obo/GO_0001706
• positive regulation of cell differentiation
  http://purl.obolibrary.org/obo/GO_0045597
• RNA polymerase II regulatory region sequence-specific DNA binding
  http://purl.obolibrary.org/obo/GO_0000977
• CD8-positive, alpha-beta T cell differentiation involved in immune response
  http://purl.obolibrary.org/obo/GO_0002302
• regulation of gene expression
  http://purl.obolibrary.org/obo/GO_0010468
• trophectodermal cell differentiation
  http://purl.obolibrary.org/obo/GO_0001829
• sequence-specific DNA binding
  http://purl.obolibrary.org/obo/GO_0043565
• positive regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0045944
• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677
• mesoderm formation
  http://purl.obolibrary.org/obo/GO_0001707
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• cell differentiation
  http://purl.obolibrary.org/obo/GO_0030154
• cerebral cortex neuron differentiation
  http://purl.obolibrary.org/obo/GO_0021895
• sequence-specific DNA binding transcription factor activity
  http://purl.obolibrary.org/obo/GO_0003700
• gastrulation
  http://purl.obolibrary.org/obo/GO_0007369
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• endodermal cell fate specification
  http://purl.obolibrary.org/obo/GO_0001714
• interferon-gamma production
  http://purl.obolibrary.org/obo/GO_0032609
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• blastocyst development
  http://purl.obolibrary.org/obo/GO_0001824

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName