CD07229

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD07229

CD07229

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Chst15

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• GalNAc 4-sulfate 6-O-sulfotransferase
• carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
• GalNAc4S-6ST
• carbohydrate sulfotransferase 15
• B-cell RAG-associated gene protein
• N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• GalNAcS-6ST
• mKIAA0598
• BRAG
• MAd5
• 4631426J05Rik

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/77590

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
  http://metadb.riken.jp/db/mgi_rdf/MGI:1924840

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_029935

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000030930

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.213582

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=608277

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Kaoru. Akita, et.al., Expression of multiple chondroitin/dermatan sulfotransferases in the neurogenic regions of the embryonic and adult central nervous system implies that complex chondroitin sulfates have a role in neural stem cell maintenance., Stem cells, 2008, 26
  http://rdf.ncbi.nlm.nih.gov/pubmed/18079434
• L K. Verkoczy, et.al., hBRAG, a novel B cell lineage cDNA encoding a type II transmembrane glycoprotein potentially involved in the regulation of recombination activating gene 1 (RAG1)., European journal of immunology, 1998, 28
  http://rdf.ncbi.nlm.nih.gov/pubmed/9754571
• Maki. Ishii, et.al., Oversulfated chondroitin sulfate plays critical roles in the neuronal migration in the cerebral cortex., The Journal of biological chemistry, 2008, 283
  http://rdf.ncbi.nlm.nih.gov/pubmed/18819920
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Shiori. Ohtake, et.al., Expression of sulfotransferases involved in the biosynthesis of chondroitin sulfate E in the bone marrow derived mast cells., Biochimica et biophysica acta, 2008, 1780
  http://rdf.ncbi.nlm.nih.gov/pubmed/18237557
• Annette. Duelli, et.al., Mast cell differentiation and activation is closely linked to expression of genes coding for the serglycin proteoglycan core protein and a distinct set of chondroitin sulfate and heparin sulfotransferases., Journal of immunology (Baltimore, Md. : 1950), 2009, 183
  http://rdf.ncbi.nlm.nih.gov/pubmed/19915053
• Ana-Marisa. Salgueiro, et.al., N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase expression during early mouse embryonic development., The International journal of developmental biology, 2006, 50
  http://rdf.ncbi.nlm.nih.gov/pubmed/17051481
• Shiori. Ohtake-Niimi, et.al., Mice deficient in N-acetylgalactosamine 4-sulfate 6-o-sulfotransferase are unable to synthesize chondroitin/dermatan sulfate containing N-acetylgalactosamine 4,6-bissulfate residues and exhibit decreased protease activity in bone marrow-derived mast cells., The Journal of biological chemistry, 2010, 285
  http://rdf.ncbi.nlm.nih.gov/pubmed/20439988
• Noriko. Okazaki, et.al., Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries., DNA research : an international journal for rapid publication of reports on genes and genomes, 2003, 10
  http://rdf.ncbi.nlm.nih.gov/pubmed/12693553

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• Golgi apparatus
  http://purl.obolibrary.org/obo/GO_0005794
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021
• N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
  http://purl.obolibrary.org/obo/GO_0050659
• hexose biosynthetic process
  http://purl.obolibrary.org/obo/GO_0019319
• transferase activity
  http://purl.obolibrary.org/obo/GO_0016740
• metabolic process
  http://purl.obolibrary.org/obo/GO_0008152
• sulfotransferase activity
  http://purl.obolibrary.org/obo/GO_0008146

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00532

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Glycosaminoglycan biosynthesis - chondroitin sulfate