CD07685

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD07685

CD07685

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Spna2

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• spectrin alpha 2

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• spectrin, non-erythroid alpha chain
• alpha-II spectrin
• spectrin alpha 2
• fodrin alpha chain
• spectrin alpha chain, brain
• alpha-spectrin 2, brain

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• brain
• alpha-fodrin
• Spna-2
• 2610027H02Rik
• Sptan1

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/20740

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• spectrin alpha, non-erythrocytic 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:98386

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001177667
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001076554
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001177668

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000057738

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.204969

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=182810

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• A. Pilz, et.al., Comparative mapping of mouse chromosome 2 and human chromosome 9q: the genes for gelsolin and dopamine beta-hydroxylase map to mouse chromosome 2., Genomics, 1992, 12
  http://rdf.ncbi.nlm.nih.gov/pubmed/1315305
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• L D. Siracusa, et.al., Identification and applications of repetitive probes for gene mapping in the mouse., Genetics, 1991, 127
  http://rdf.ncbi.nlm.nih.gov/pubmed/1673105
• C W. Hoopes, et.al., Mapping of the mouse Rxr loci encoding nuclear retinoid X receptors RXR alpha, RXR beta, and RXR gamma., Genomics, 1992, 14
  http://rdf.ncbi.nlm.nih.gov/pubmed/1358808
• Miroslawa. Siatecka, et.al., Severe anemia in the Nan mutant mouse caused by sequence-selective disruption of erythroid Kruppel-like factor., Proceedings of the National Academy of Sciences of the United States of America, 2010, 107
  http://rdf.ncbi.nlm.nih.gov/pubmed/20696915
• W E. Zimmer, et.al., Developmental expression of brain beta-spectrin isoform messenger RNAs., Brain research, 1992, 594
  http://rdf.ncbi.nlm.nih.gov/pubmed/1467942
• Larissa. Lozovatsky, et.al., CASK deletion in intestinal epithelia causes mislocalization of LIN7C and the DLG1/Scrib polarity complex without affecting cell polarity., Molecular biology of the cell, 2009, 20
  http://rdf.ncbi.nlm.nih.gov/pubmed/19726564
• Nan. Gao, et.al., Cdx2 regulates endo-lysosomal function and epithelial cell polarity., Genes & development, 2010, 24
  http://rdf.ncbi.nlm.nih.gov/pubmed/20551175
• M L. Bloom, et.al., Brain beta spectrin isoform 235 (Spnb-2) maps to mouse chromosome 11., Mammalian genome : official journal of the International Mammalian Genome Society, 1992, 3
  http://rdf.ncbi.nlm.nih.gov/pubmed/1638088
• Cynthia M. Grimsley-Myers, et.al., The small GTPase Rac1 regulates auditory hair cell morphogenesis., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2009, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/20016102

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• paranode region of axon
  http://purl.obolibrary.org/obo/GO_0033270
• Z disc
  http://purl.obolibrary.org/obo/GO_0030018
• macromolecular complex
  http://purl.obolibrary.org/obo/GO_0032991
• cuticular plate
  http://purl.obolibrary.org/obo/GO_0032437
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• intracellular membrane-bounded organelle
  http://purl.obolibrary.org/obo/GO_0043231
• microtubule cytoskeleton
  http://purl.obolibrary.org/obo/GO_0015630
• protein heterodimerization activity
  http://purl.obolibrary.org/obo/GO_0046982
• macromolecular complex binding
  http://purl.obolibrary.org/obo/GO_0044877
• cortical cytoskeleton
  http://purl.obolibrary.org/obo/GO_0030863
• cytoskeleton
  http://purl.obolibrary.org/obo/GO_0005856
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• spectrin binding
  http://purl.obolibrary.org/obo/GO_0030507
• calmodulin binding
  http://purl.obolibrary.org/obo/GO_0005516
• fascia adherens
  http://purl.obolibrary.org/obo/GO_0005916
• protein N-terminus binding
  http://purl.obolibrary.org/obo/GO_0047485
• plasma membrane
  http://purl.obolibrary.org/obo/GO_0005886
• calcium ion binding
  http://purl.obolibrary.org/obo/GO_0005509
• lateral plasma membrane
  http://purl.obolibrary.org/obo/GO_0016328
• actin binding
  http://purl.obolibrary.org/obo/GO_0003779
• actin filament capping
  http://purl.obolibrary.org/obo/GO_0051693
• actin cytoskeleton reorganization
  http://purl.obolibrary.org/obo/GO_0031532
• syntaxin binding
  http://purl.obolibrary.org/obo/GO_0019905

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName