CD08249

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD08249

CD08249

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Sema3d

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
• semaphorin-3D

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 4631426B19Rik

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/108151

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
  http://metadb.riken.jp/db/mgi_rdf/MGI:1860118

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_028882

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000040254

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.89313

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=609907

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Bin. Chen, et.al., Fezl regulates the differentiation and axon targeting of layer 5 subcortical projection neurons in cerebral cortex., Proceedings of the National Academy of Sciences of the United States of America, 2005, 102
  http://rdf.ncbi.nlm.nih.gov/pubmed/16284245
• Lely A. Quina, et.al., Brn3a and Nurr1 mediate a gene regulatory pathway for habenula development., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2009, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/19906978
• Ling. Chung, et.al., Semaphorin signaling facilitates cleft formation in the developing salivary gland., Development (Cambridge, England), 2007, 134
  http://rdf.ncbi.nlm.nih.gov/pubmed/17626059
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Susan. Magdaleno, et.al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system., PLoS biology, 2006, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/16602821
• Kaoru. Takahashi, et.al., Expression of the semaphorins Sema 3D and Sema 3F in the developing parathyroid and thymus., Developmental dynamics : an official publication of the American Association of Anatomists, 2008, 237
  http://rdf.ncbi.nlm.nih.gov/pubmed/18489001
• Cheng. Xu, et.al., Expression of Robo/Slit and Semaphorin/Plexin/Neuropilin family members in the developing hypothalamic paraventricular and supraoptic nuclei., Gene expression patterns : GEP, 2008, 8
  http://rdf.ncbi.nlm.nih.gov/pubmed/18617019
• L M. Tarantino, et.al., A high-resolution radiation hybrid map of the proximal portion of mouse chromosome 5., Genomics, 2000, 66
  http://rdf.ncbi.nlm.nih.gov/pubmed/10843805
• Samia. Cohen, et.al., A semaphorin code defines subpopulations of spinal motor neurons during mouse development., The European journal of neuroscience, 2005, 21
  http://rdf.ncbi.nlm.nih.gov/pubmed/15869472

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• extracellular region
  http://purl.obolibrary.org/obo/GO_0005576
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• cargo receptor activity
  http://purl.obolibrary.org/obo/GO_0038024
• signaling receptor activity
  http://purl.obolibrary.org/obo/GO_0038023
• nervous system development
  http://purl.obolibrary.org/obo/GO_0007399
• cell differentiation
  http://purl.obolibrary.org/obo/GO_0030154

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04360

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Axon guidance