CD10337

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD10337

CD10337

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Zcchc11

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• zinc finger, CCHC domain containing 11

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• TUTase 4
• zinc finger, CCHC domain containing 11
• zinc finger CCHC domain-containing protein 11
• terminal uridylyltransferase 4

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 9230115F04Rik
• mKIAA0191
• PPAPD3
• 6030404K05Rik

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/230594

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• zinc finger, CCHC domain containing 11
  http://metadb.riken.jp/db/mgi_rdf/MGI:2445126

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_175472

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000034610

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.446602
• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.25181

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=613692

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
• Yasumasa. Minoda, et.al., A novel Zinc finger protein, ZCCHC11, interacts with TIFA and modulates TLR signaling., Biochemical and biophysical research communications, 2006, 344
  http://rdf.ncbi.nlm.nih.gov/pubmed/16643855
• Matthew R. Jones, et.al., Zcchc11-dependent uridylation of microRNA directs cytokine expression., Nature cell biology, 2009, 11
  http://rdf.ncbi.nlm.nih.gov/pubmed/19701194
• John P. Hagan, et.al., Lin28 recruits the TUTase Zcchc11 to inhibit let-7 maturation in mouse embryonic stem cells., Nature structural & molecular biology, 2009, 16
  http://rdf.ncbi.nlm.nih.gov/pubmed/19713958

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• pre-miRNA processing
  http://purl.obolibrary.org/obo/GO_0031054
• positive regulation of interleukin-6 production
  http://purl.obolibrary.org/obo/GO_0032755
• transferase activity
  http://purl.obolibrary.org/obo/GO_0016740
• nucleotidyltransferase activity
  http://purl.obolibrary.org/obo/GO_0016779
• RNA uridylyltransferase activity
  http://purl.obolibrary.org/obo/GO_0050265
• regulation of lipopolysaccharide-mediated signaling pathway
  http://purl.obolibrary.org/obo/GO_0031664
• negative regulation of NF-kappaB transcription factor activity
  http://purl.obolibrary.org/obo/GO_0032088
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• interleukin-6-mediated signaling pathway
  http://purl.obolibrary.org/obo/GO_0070102
• miRNA catabolic process
  http://purl.obolibrary.org/obo/GO_0010587
• zinc ion binding
  http://purl.obolibrary.org/obo/GO_0008270
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• miRNA metabolic process
  http://purl.obolibrary.org/obo/GO_0010586
• nucleolus
  http://purl.obolibrary.org/obo/GO_0005730
• gene silencing by RNA
  http://purl.obolibrary.org/obo/GO_0031047
• cytokine production
  http://purl.obolibrary.org/obo/GO_0001816
• nucleic acid binding
  http://purl.obolibrary.org/obo/GO_0003676
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName