CD10711

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD10711

CD10711

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Sox1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• SRY-box containing gene 1

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• transcription factor SOX-1
• SRY-box containing gene 1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• BB176347
• Sox-1

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/20664

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• SRY (sex determining region Y)-box 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:98357

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_009233

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.39088

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=602148

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Olivia. Alder, et.al., Ring1B and Suv39h1 delineate distinct chromatin states at bivalent genes during early mouse lineage commitment., Development (Cambridge, England), 2010, 137
  http://rdf.ncbi.nlm.nih.gov/pubmed/20573702
• J. Gubbay, et.al., A gene mapping to the sex-determining region of the mouse Y chromosome is a member of a novel family of embryonically expressed genes., Nature, 1990, 346
  http://rdf.ncbi.nlm.nih.gov/pubmed/2374589
• Luis C. Fernandez-Diaz, et.al., The absence of Prep1 causes p53-dependent apoptosis of mouse pluripotent epiblast cells., Development (Cambridge, England), 2010, 137
  http://rdf.ncbi.nlm.nih.gov/pubmed/20826531
• E M. Wright, et.al., Seven new members of the Sox gene family expressed during mouse development., Nucleic acids research, 1993, 21
  http://rdf.ncbi.nlm.nih.gov/pubmed/8441686
• J. Collignon, et.al., A comparison of the properties of Sox-3 with Sry and two related genes, Sox-1 and Sox-2., Development (Cambridge, England), 1996, 122
  http://rdf.ncbi.nlm.nih.gov/pubmed/8625802
• Shengguo. Li, et.al., A Cre transgenic line for studying V2 neuronal lineages and functions in the spinal cord., Genesis (New York, N.Y. : 2000), 2010, 48
  http://rdf.ncbi.nlm.nih.gov/pubmed/20806357
• S. Malas, et.al., Genetic and physical mapping of the murine Sox1 gene., Mammalian genome : official journal of the International Mammalian Genome Society, 1996, 7
  http://rdf.ncbi.nlm.nih.gov/pubmed/8678988
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Helen. Panayi, et.al., Sox1 is required for the specification of a novel p2-derived interneuron subtype in the mouse ventral spinal cord., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2010, 30
  http://rdf.ncbi.nlm.nih.gov/pubmed/20844123
• M A. Behlke, et.al., Evidence that the SRY protein is encoded by a single exon on the human Y chromosome., Genomics, 1993, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/8244390

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677
• sequence-specific DNA binding
  http://purl.obolibrary.org/obo/GO_0043565
• forebrain development
  http://purl.obolibrary.org/obo/GO_0030900
• core promoter sequence-specific DNA binding
  http://purl.obolibrary.org/obo/GO_0001046
• ventral spinal cord interneuron specification
  http://purl.obolibrary.org/obo/GO_0021521
• lens morphogenesis in camera-type eye
  http://purl.obolibrary.org/obo/GO_0002089
• forebrain neuron development
  http://purl.obolibrary.org/obo/GO_0021884
• neuron migration
  http://purl.obolibrary.org/obo/GO_0001764
• forebrain neuron differentiation
  http://purl.obolibrary.org/obo/GO_0021879
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName