CD11985

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD11985

CD11985

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Msx1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• homeobox, msh-like 1

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• homeobox protein Hox-7
• msh homeobox 1-like protein
• homeobox protein MSX-1
• hox-7.1
• homeo box, msh-like 1
• homeobox, msh-like 1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• muscle-segment homeobox
• Hox7
• Hox7.1
• msh
• AI324650
• Hox-7
• AA675338

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/17701

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• msh homeobox 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:97168

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_010835

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000048450

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.256509

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=142983

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• M P. Scott, Vertebrate homeobox gene nomenclature., Cell, 1992, 71
  http://rdf.ncbi.nlm.nih.gov/pubmed/1358459
• A. MacKenzie, et.al., Expression patterns of the homeobox gene, Hox-8, in the mouse embryo suggest a role in specifying tooth initiation and shape., Development (Cambridge, England), 1992, 115
  http://rdf.ncbi.nlm.nih.gov/pubmed/1358591
• Y. Wang, et.al., Id expression during mouse development: a role in morphogenesis., Developmental dynamics : an official publication of the American Association of Anatomists, 1992, 194
  http://rdf.ncbi.nlm.nih.gov/pubmed/1361374
• Lu. Li, et.al., BmprIa is required in mesenchymal tissue and has limited redundant function with BmprIb in tooth and palate development., Developmental biology, 2011, 349
  http://rdf.ncbi.nlm.nih.gov/pubmed/21034733
• Minkui. Lin, et.al., Wnt5a regulates growth, patterning, and odontoblast differentiation of developing mouse tooth., Developmental dynamics : an official publication of the American Association of Anatomists, 2011, 240
  http://rdf.ncbi.nlm.nih.gov/pubmed/21246660
• Langying. Song, et.al., Cell autonomous requirement of endocardial Smad4 during atrioventricular cushion development in mouse embryos., Developmental dynamics : an official publication of the American Association of Anatomists, 2011, 240
  http://rdf.ncbi.nlm.nih.gov/pubmed/21089072
• Jian. Qin, et.al., Intraflagellar transport protein 122 antagonizes Sonic Hedgehog signaling and controls ciliary localization of pathway components., Proceedings of the National Academy of Sciences of the United States of America, 2011, 108
  http://rdf.ncbi.nlm.nih.gov/pubmed/21209331
• G E. Lyons, et.al., Multiple sites of Hox-7 expression during mouse embryogenesis: comparison with retinoic acid receptor mRNA localization., Molecular reproduction and development, 1992, 32
  http://rdf.ncbi.nlm.nih.gov/pubmed/1353971
• K. Song, et.al., Expression of Hox-7.1 in myoblasts inhibits terminal differentiation and induces cell transformation., Nature, 1992, 360
  http://rdf.ncbi.nlm.nih.gov/pubmed/1360150
• Neil T. Sheehy, et.al., The neural crest-enriched microRNA miR-452 regulates epithelial-mesenchymal signaling in the first pharyngeal arch., Development (Cambridge, England), 2010, 137
  http://rdf.ncbi.nlm.nih.gov/pubmed/21098571

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• cell morphogenesis
  http://purl.obolibrary.org/obo/GO_0000902
• sequence-specific DNA binding
  http://purl.obolibrary.org/obo/GO_0043565
• protein localization to nucleus
  http://purl.obolibrary.org/obo/GO_0034504
• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677
• bone morphogenesis
  http://purl.obolibrary.org/obo/GO_0060349
• cartilage morphogenesis
  http://purl.obolibrary.org/obo/GO_0060536
• regulation of apoptotic process
  http://purl.obolibrary.org/obo/GO_0042981
• BMP signaling pathway involved in heart development
  http://purl.obolibrary.org/obo/GO_0061312
• positive regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0045944
• negative regulation of apoptotic process
  http://purl.obolibrary.org/obo/GO_0043066
• RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity
  http://purl.obolibrary.org/obo/GO_0000982
• odontogenesis
  http://purl.obolibrary.org/obo/GO_0042476
• negative regulation of striated muscle cell differentiation
  http://purl.obolibrary.org/obo/GO_0051154
• muscle organ development
  http://purl.obolibrary.org/obo/GO_0007517
• middle ear morphogenesis
  http://purl.obolibrary.org/obo/GO_0042474
• apoptotic nuclear changes
  http://purl.obolibrary.org/obo/GO_0030262
• midbrain development
  http://purl.obolibrary.org/obo/GO_0030901
• negative regulation of cell proliferation
  http://purl.obolibrary.org/obo/GO_0008285
• anterior/posterior pattern specification
  http://purl.obolibrary.org/obo/GO_0009952
• signal transduction involved in regulation of gene expression
  http://purl.obolibrary.org/obo/GO_0023019
• embryonic hindlimb morphogenesis
  http://purl.obolibrary.org/obo/GO_0035116
• protein stabilization
  http://purl.obolibrary.org/obo/GO_0050821
• cartilage development
  http://purl.obolibrary.org/obo/GO_0051216
• in utero embryonic development
  http://purl.obolibrary.org/obo/GO_0001701
• regulation of odontogenesis
  http://purl.obolibrary.org/obo/GO_0042481
• positive regulation of apoptotic process
  http://purl.obolibrary.org/obo/GO_0043065
• transcription factor complex
  http://purl.obolibrary.org/obo/GO_0005667
• epithelial to mesenchymal transition involved in endocardial cushion formation
  http://purl.obolibrary.org/obo/GO_0003198
• embryonic digit morphogenesis
  http://purl.obolibrary.org/obo/GO_0042733
• BMP signaling pathway
  http://purl.obolibrary.org/obo/GO_0030509
• negative regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0000122
• p53 binding
  http://purl.obolibrary.org/obo/GO_0002039
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• forebrain development
  http://purl.obolibrary.org/obo/GO_0030900
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• mammary gland epithelium development
  http://purl.obolibrary.org/obo/GO_0061180
• heart morphogenesis
  http://purl.obolibrary.org/obo/GO_0003007
• odontogenesis of dentin-containing tooth
  http://purl.obolibrary.org/obo/GO_0042475
• embryonic nail plate morphogenesis
  http://purl.obolibrary.org/obo/GO_0035880
• embryonic limb morphogenesis
  http://purl.obolibrary.org/obo/GO_0030326
• heart development
  http://purl.obolibrary.org/obo/GO_0007507
• stem cell differentiation
  http://purl.obolibrary.org/obo/GO_0048863
• negative regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0045892
• embryonic forelimb morphogenesis
  http://purl.obolibrary.org/obo/GO_0035115
• face morphogenesis
  http://purl.obolibrary.org/obo/GO_0060325
• negative regulation of transcription regulatory region DNA binding
  http://purl.obolibrary.org/obo/GO_2000678
• positive regulation of BMP signaling pathway
  http://purl.obolibrary.org/obo/GO_0030513
• negative regulation of DNA binding
  http://purl.obolibrary.org/obo/GO_0043392
• negative regulation of cell growth
  http://purl.obolibrary.org/obo/GO_0030308

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map05166

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• HTLV-I infection