CD12016

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD12016

CD12016

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Casp7

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• caspase 7

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• cysteine protease LICE2
• caspase 7
• apoptotic protease Mch-3
• CASP-7

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• mCASP-7
• caspase-7
• Mch3
• AI314680
• ICE-IAP3
• CMH-1

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/12369

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• caspase 7
  http://metadb.riken.jp/db/mgi_rdf/MGI:109383

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_007611

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000025076

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.35687

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=601761

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• R M. Barge, et.al., Differential involvement of caspases in apoptosis of myeloid leukemic cells induced by chemotherapy versus growth factor withdrawal., FEBS letters, 1997, 409
  http://rdf.ncbi.nlm.nih.gov/pubmed/9202146
• T. Mukasa, et.al., Specific expression of CPP32 in sensory neurons of mouse embryos and activation of CPP32 in the apoptosis induced by a withdrawal of NGF., Biochemical and biophysical research communications, 1997, 231
  http://rdf.ncbi.nlm.nih.gov/pubmed/9070890
• Julián. Pardo, et.al., Caspase-dependent inhibition of mousepox replication by gzmB., PloS one, 2009, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/19838298
• Mohamed. Lamkanfi, et.al., Inflammasome-dependent release of the alarmin HMGB1 in endotoxemia., Journal of immunology (Baltimore, Md. : 1950), 2010, 185
  http://rdf.ncbi.nlm.nih.gov/pubmed/20802146
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Teppei. Ikeda, et.al., Expression of caspase family and muscle- and apoptosis-specific genes during skeletal myogenesis in mouse embryo., The Journal of veterinary medical science, 2009, 71
  http://rdf.ncbi.nlm.nih.gov/pubmed/19801895
• T S. Juan, et.al., Identification and mapping of Casp7, a cysteine protease resembling CPP32 beta, interleukin-1 beta converting enzyme, and CED-3., Genomics, 1997, 40
  http://rdf.ncbi.nlm.nih.gov/pubmed/9070923
• M. Van de Craen, et.al., Characterization of seven murine caspase family members., FEBS letters, 1997, 403
  http://rdf.ncbi.nlm.nih.gov/pubmed/9038361
• Jai. Prakash, et.al., Albumin-binding and tumor vasculature determine the antitumor effect of 15-deoxy-Delta-(12,14)-prostaglandin-J(2) in vivo., Neoplasia (New York, N.Y.), 2009, 11
  http://rdf.ncbi.nlm.nih.gov/pubmed/20019843
• T. Mukasa, et.al., Wortmannin enhances CPP32-like activity during neuronal differentiation of P19 embryonal carcinoma cells induced by retinoic acid., Biochemical and biophysical research communications, 1997, 232
  http://rdf.ncbi.nlm.nih.gov/pubmed/9125129

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• cysteine-type peptidase activity
  http://purl.obolibrary.org/obo/GO_0008234
• positive regulation of neuron apoptotic process
  http://purl.obolibrary.org/obo/GO_0043525
• aspartic-type endopeptidase activity
  http://purl.obolibrary.org/obo/GO_0004190
• response to UV
  http://purl.obolibrary.org/obo/GO_0009411
• soluble fraction
  http://purl.obolibrary.org/obo/GO_0005625
• release of cytochrome c from mitochondria
  http://purl.obolibrary.org/obo/GO_0001836
• regulation of apoptotic process
  http://purl.obolibrary.org/obo/GO_0042981
• heart development
  http://purl.obolibrary.org/obo/GO_0007507
• apoptotic process
  http://purl.obolibrary.org/obo/GO_0006915
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• cysteine-type endopeptidase activity
  http://purl.obolibrary.org/obo/GO_0004197
• protein processing
  http://purl.obolibrary.org/obo/GO_0016485
• metabolic process
  http://purl.obolibrary.org/obo/GO_0008152
• peptidase activity
  http://purl.obolibrary.org/obo/GO_0008233
• cytosol
  http://purl.obolibrary.org/obo/GO_0005829
• hydrolase activity
  http://purl.obolibrary.org/obo/GO_0016787
• microsome
  http://purl.obolibrary.org/obo/GO_0005792
• proteolysis
  http://purl.obolibrary.org/obo/GO_0006508

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map05133
• http://www.genome.jp/dbget-bin/www_bget?map04210
• http://www.genome.jp/dbget-bin/www_bget?map05010
• http://www.genome.jp/dbget-bin/www_bget?map05134

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Pertussis
• Legionellosis
• Alzheimer's disease
• Apoptosis