CD12280

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD12280

CD12280

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Rab11a

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• RAB11a, member RAS oncogene family

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• rab-11
• ras-related protein Rab-11A
• RAB11a, member RAS oncogene family

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/53869

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• RAB11A, member RAS oncogene family
  http://metadb.riken.jp/db/mgi_rdf/MGI:1858202

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_017382

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000004771

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.1387

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=605570

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Mitsunori. Fukuda, et.al., Slac2-a/melanophilin, the missing link between Rab27 and myosin Va: implications of a tripartite protein complex for melanosome transport., The Journal of biological chemistry, 2002, 277
  http://rdf.ncbi.nlm.nih.gov/pubmed/11856727
• Taruho S. Kuroda, et.al., The Slp homology domain of synaptotagmin-like proteins 1-4 and Slac2 functions as a novel Rab27A binding domain., The Journal of biological chemistry, 2002, 277
  http://rdf.ncbi.nlm.nih.gov/pubmed/11773082
• Mitsunori. Fukuda, Distinct Rab binding specificity of Rim1, Rim2, rabphilin, and Noc2. Identification of a critical determinant of Rab3A/Rab27A recognition by Rim2., The Journal of biological chemistry, 2003, 278
  http://rdf.ncbi.nlm.nih.gov/pubmed/12578829
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
• Kenji. Sugawara, et.al., Rab11 and its effector Rip11 participate in regulation of insulin granule exocytosis., Genes to cells : devoted to molecular & cellular mechanisms, 2009, 14
  http://rdf.ncbi.nlm.nih.gov/pubmed/19335615
• Andrew R. Cullinane, et.al., Mutations in VIPAR cause an arthrogryposis, renal dysfunction and cholestasis syndrome phenotype with defects in epithelial polarization., Nature genetics, 2010, 42
  http://rdf.ncbi.nlm.nih.gov/pubmed/20190753
• S G. Bhartur, et.al., Genomic structure of murine Rab11 family members., Biochemical and biophysical research communications, 2000, 269
  http://rdf.ncbi.nlm.nih.gov/pubmed/10708602
• Shigetoshi. Yokoyama, et.al., A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58., Developmental cell, 2009, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/20059953
• Xueyi. Li, et.al., Disruption of Rab11 activity in a knock-in mouse model of Huntington's disease., Neurobiology of disease, 2009, 36
  http://rdf.ncbi.nlm.nih.gov/pubmed/19699304
• Xueyi. Li, et.al., Aberrant Rab11-dependent trafficking of the neuronal glutamate transporter EAAC1 causes oxidative stress and cell death in Huntington's disease., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2010, 30
  http://rdf.ncbi.nlm.nih.gov/pubmed/20357106

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• mitochondrion
  http://purl.obolibrary.org/obo/GO_0005739
• transport
  http://purl.obolibrary.org/obo/GO_0006810
• cell cycle
  http://purl.obolibrary.org/obo/GO_0007049
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• nucleotide binding
  http://purl.obolibrary.org/obo/GO_0000166
• GTPase activity
  http://purl.obolibrary.org/obo/GO_0003924
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• protein transport
  http://purl.obolibrary.org/obo/GO_0015031
• trans-Golgi network
  http://purl.obolibrary.org/obo/GO_0005802
• small GTPase mediated signal transduction
  http://purl.obolibrary.org/obo/GO_0007264
• neuron projection development
  http://purl.obolibrary.org/obo/GO_0031175
• cleavage furrow
  http://purl.obolibrary.org/obo/GO_0032154
• protein localization to plasma membrane
  http://purl.obolibrary.org/obo/GO_0072659
• regulation of long-term neuronal synaptic plasticity
  http://purl.obolibrary.org/obo/GO_0048169
• recycling endosome
  http://purl.obolibrary.org/obo/GO_0055037
• cytokinesis
  http://purl.obolibrary.org/obo/GO_0000910
• vesicle-mediated transport
  http://purl.obolibrary.org/obo/GO_0016192
• macromolecular complex
  http://purl.obolibrary.org/obo/GO_0032991
• endosome
  http://purl.obolibrary.org/obo/GO_0005768
• transport vesicle
  http://purl.obolibrary.org/obo/GO_0030133
• plasma membrane
  http://purl.obolibrary.org/obo/GO_0005886
• GTP binding
  http://purl.obolibrary.org/obo/GO_0005525
• regulation of protein transport
  http://purl.obolibrary.org/obo/GO_0051223

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04972
• http://www.genome.jp/dbget-bin/www_bget?map04961
• http://www.genome.jp/dbget-bin/www_bget?map04144
• http://www.genome.jp/dbget-bin/www_bget?map04962

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Vasopressin-regulated water reabsorption
• Endocytosis
• Pancreatic secretion
• Endocrine and other factor-regulated calcium reabsorption