CD13011

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD13011

CD13011

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Ssbp2

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• single-stranded DNA binding protein 2

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• sequence-specific single-stranded-DNA-binding protein 2
• single-stranded DNA binding protein 2
• single-stranded DNA-binding protein 2

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• SSDP2
• AU067692
• A830008M03Rik
• AW558684
• Hspc116
• 1500004K09Rik
• 2310079I02Rik
• 9330163K02Rik

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/66970

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• single-stranded DNA binding protein 2
  http://metadb.riken.jp/db/mgi_rdf/MGI:1914220

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_024186
• https://www.ncbi.nlm.nih.gov/nuccore/NM_024272

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000003992

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.343095

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=607389

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Donald J. van Meyel, et.al., Ssdp proteins bind to LIM-interacting co-factors and regulate the activity of LIM-homeodomain protein complexes in vivo., Development (Cambridge, England), 2003, 130
  http://rdf.ncbi.nlm.nih.gov/pubmed/12642495
• Lan. Chen, et.al., Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development., Proceedings of the National Academy of Sciences of the United States of America, 2002, 99
  http://rdf.ncbi.nlm.nih.gov/pubmed/12381786
• H. Suzuki, et.al., Protein-protein interaction panel using mouse full-length cDNAs., Genome research, 2001, 11
  http://rdf.ncbi.nlm.nih.gov/pubmed/11591653
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Y. Wang, et.al., SSBP2 is an in vivo tumor suppressor and regulator of LDB1 stability., Oncogene, 2010, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/20348955
• Susan. Magdaleno, et.al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system., PLoS biology, 2006, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/16602821
• Tomomi. Shimogori, et.al., A genomic atlas of mouse hypothalamic development., Nature neuroscience, 2010, 13
  http://rdf.ncbi.nlm.nih.gov/pubmed/20436479
• Shigetoshi. Yokoyama, et.al., A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58., Developmental cell, 2009, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/20059953

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• single-stranded DNA binding
  http://purl.obolibrary.org/obo/GO_0006330
• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677
• single-stranded DNA binding
  http://purl.obolibrary.org/obo/GO_0003697
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName