CD13235

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD13235

CD13235

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Galnt7

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 7
• protein-UDP acetylgalactosaminyltransferase 7
• polypeptide GalNAc transferase 7
• galNAc-T7
• N-acetylgalactosaminyltransferase 7
• UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
• pp-GaNTase 7

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• AI225872
• ppGaNTase-T7

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/108150

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
  http://metadb.riken.jp/db/mgi_rdf/MGI:1349449

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001167981
• https://www.ncbi.nlm.nih.gov/nuccore/NM_144731

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000031608

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.62886

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=605005

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• K G. Ten Hagen, et.al., Cloning and characterization of a ninth member of the UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase family, ppGaNTase-T9., The Journal of biological chemistry, 2001, 276
  http://rdf.ncbi.nlm.nih.gov/pubmed/11278534
• Shireen. Kahai, et.al., MicroRNA miR-378 regulates nephronectin expression modulating osteoblast differentiation by targeting GalNT-7., PloS one, 2009, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/19844573
• P D. Kingsley, et.al., Diverse spatial expression patterns of UDP-GalNAc:polypeptide N-acetylgalactosaminyl-transferase family member mRNAs during mouse development., Glycobiology, 2000, 10
  http://rdf.ncbi.nlm.nih.gov/pubmed/11159923
• Y. Piao, et.al., Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method., Genome research, 2001, 11
  http://rdf.ncbi.nlm.nih.gov/pubmed/11544199
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Stephen N. Sansom, et.al., The level of the transcription factor Pax6 is essential for controlling the balance between neural stem cell self-renewal and neurogenesis., PLoS genetics, 2009, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/19521500
• K G. Ten Hagen, et.al., Characterization of a UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase that displays glycopeptide N-acetylgalactosaminyltransferase activity., The Journal of biological chemistry, 1999, 274
  http://rdf.ncbi.nlm.nih.gov/pubmed/10488133

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• metabolic process
  http://purl.obolibrary.org/obo/GO_0008152
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• transferase activity
  http://purl.obolibrary.org/obo/GO_0016740
• polypeptide N-acetylgalactosaminyltransferase activity
  http://purl.obolibrary.org/obo/GO_0004653
• transferase activity, transferring glycosyl groups
  http://purl.obolibrary.org/obo/GO_0016757
• protein O-linked glycosylation
  http://purl.obolibrary.org/obo/GO_0006493
• carbohydrate binding
  http://purl.obolibrary.org/obo/GO_0030246
• Golgi apparatus
  http://purl.obolibrary.org/obo/GO_0005794

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00512
• http://www.genome.jp/dbget-bin/www_bget?map01100

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Mucin type O-Glycan biosynthesis
• Metabolic pathways