CD13707

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD13707

CD13707

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Exosc10

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• exosome component 10

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• polymyositis/scleroderma autoantigen 2 homolog
• autoantigen PM/Scl 2 homolog
• exosome component 10

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Pmscl2
• PM-Scl
• RRP6
• p3
• p2
• p4
• PM/Scl-100

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/50912

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• exosome component 10
  http://metadb.riken.jp/db/mgi_rdf/MGI:1355322

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_016699

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000017264

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.266635

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=605960

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Y. Piao, et.al., Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method., Genome research, 2001, 11
  http://rdf.ncbi.nlm.nih.gov/pubmed/11544199
• Valery. Bliskovsky, et.al., Frap, FKBP12 rapamycin-associated protein, is a candidate gene for the plasmacytoma resistance locus Pctr2 and can act as a tumor suppressor gene., Proceedings of the National Academy of Sciences of the United States of America, 2003, 100
  http://rdf.ncbi.nlm.nih.gov/pubmed/14634209
• V. Bliskovski, et.al., Structure and localization of mouse Pmscl1 and Pmscl2 genes., Genomics, 2000, 64
  http://rdf.ncbi.nlm.nih.gov/pubmed/10708524
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
• Roland H. Friedel, et.al., EUCOMM--the European conditional mouse mutagenesis program., Briefings in functional genomics & proteomics, 2007, 6
  http://rdf.ncbi.nlm.nih.gov/pubmed/17967808

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• nucleotide binding
  http://purl.obolibrary.org/obo/GO_0000166
• catalytic activity
  http://purl.obolibrary.org/obo/GO_0003824
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• nuclear mRNA surveillance
  http://purl.obolibrary.org/obo/GO_0071028
• intracellular
  http://purl.obolibrary.org/obo/GO_0005622
• exonuclease activity
  http://purl.obolibrary.org/obo/GO_0004527
• nuclease activity
  http://purl.obolibrary.org/obo/GO_0004518
• cellular metabolic process
  http://purl.obolibrary.org/obo/GO_0044237
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• histone mRNA catabolic process
  http://purl.obolibrary.org/obo/GO_0071044
• transcriptionally active chromatin
  http://purl.obolibrary.org/obo/GO_0035327
• nuclear retention of unspliced pre-mRNA at the site of transcription
  http://purl.obolibrary.org/obo/GO_0071048
• CUT catabolic process
  http://purl.obolibrary.org/obo/GO_0071034
• hydrolase activity
  http://purl.obolibrary.org/obo/GO_0016787
• exosome (RNase complex)
  http://purl.obolibrary.org/obo/GO_0000178
• nuclear polyadenylation-dependent rRNA catabolic process
  http://purl.obolibrary.org/obo/GO_0071035
• nucleobase-containing compound metabolic process
  http://purl.obolibrary.org/obo/GO_0006139
• maturation of 5.8S rRNA
  http://purl.obolibrary.org/obo/GO_0000460
• RNA binding
  http://purl.obolibrary.org/obo/GO_0003723
• nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
  http://purl.obolibrary.org/obo/GO_0000184
• rRNA processing
  http://purl.obolibrary.org/obo/GO_0006364
• nuclear-transcribed mRNA catabolic process
  http://purl.obolibrary.org/obo/GO_0000956
• nucleic acid binding
  http://purl.obolibrary.org/obo/GO_0003676
• exoribonuclease activity
  http://purl.obolibrary.org/obo/GO_0004532
• nucleolus
  http://purl.obolibrary.org/obo/GO_0005730
• RNA processing
  http://purl.obolibrary.org/obo/GO_0006396
• nuclear exosome (RNase complex)
  http://purl.obolibrary.org/obo/GO_0000176

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map03018

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• RNA degradation