CD16186

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD16186

CD16186

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Trim13

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• tripartite motif-containing 13

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• E3 ubiquitin-protein ligase TRIM13
• tripartite motif-containing 13
• tripartite motif-containing protein 13
• ret finger protein 2
• tripartite motif protein 13
• putative tumor suppressor RFP2

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 3110001L12Rik
• CAR
• Rfp2
• LEU5
• RNF77

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/66597

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• tripartite motif-containing 13
  http://metadb.riken.jp/db/mgi_rdf/MGI:1913847

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001164220
• https://www.ncbi.nlm.nih.gov/nuccore/NM_023233

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000035235

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=605661

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• A. Reymond, et.al., The tripartite motif family identifies cell compartments., The EMBO journal, 2001, 20
  http://rdf.ncbi.nlm.nih.gov/pubmed/11331580
• Ancha. Baranova, et.al., Distinct organization of the candidate tumor suppressor gene RFP2 in human and mouse: multiple mRNA isoforms in both species- and human-specific antisense transcript RFP2OS., Gene, 2003, 321
  http://rdf.ncbi.nlm.nih.gov/pubmed/14636997
• B. Kapanadze, et.al., Comparative sequence analysis of a region on human chromosome 13q14, frequently deleted in B-cell chronic lymphocytic leukemia, and its homologous region on mouse chromosome 14., Genomics, 2000, 70
  http://rdf.ncbi.nlm.nih.gov/pubmed/11161783
• Roland H. Friedel, et.al., EUCOMM--the European conditional mouse mutagenesis program., Briefings in functional genomics & proteomics, 2007, 6
  http://rdf.ncbi.nlm.nih.gov/pubmed/17967808
• Martin M. Corcoran, et.al., DLEU2 encodes an antisense RNA for the putative bicistronic RFP2/LEU5 gene in humans and mouse., Genes, chromosomes & cancer, 2004, 40
  http://rdf.ncbi.nlm.nih.gov/pubmed/15188451
• Elizabeth S. Raveche, et.al., Abnormal microRNA-16 locus with synteny to human 13q14 linked to CLL in NZB mice., Blood, 2007, 109
  http://rdf.ncbi.nlm.nih.gov/pubmed/17351108

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• endoplasmic reticulum membrane
  http://purl.obolibrary.org/obo/GO_0005789
• zinc ion binding
  http://purl.obolibrary.org/obo/GO_0008270
• proteasome-mediated ubiquitin-dependent protein catabolic process
  http://purl.obolibrary.org/obo/GO_0043161
• metabolic process
  http://purl.obolibrary.org/obo/GO_0008152
• signal transduction
  http://purl.obolibrary.org/obo/GO_0007165
• positive regulation of I-kappaB kinase/NF-kappaB signaling
  http://purl.obolibrary.org/obo/GO_0043123
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• signal transducer activity
  http://purl.obolibrary.org/obo/GO_0004871
• ligase activity
  http://purl.obolibrary.org/obo/GO_0016874
• protein autoubiquitination
  http://purl.obolibrary.org/obo/GO_0051865
• intracellular
  http://purl.obolibrary.org/obo/GO_0005622
• endoplasmic reticulum
  http://purl.obolibrary.org/obo/GO_0005783
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName