CD16436

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD16436

CD16436

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Afg3l1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• AFG3(ATPase family gene 3)-like 1 (yeast)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• AFG3(ATPase family gene 3)-like 1 (yeast)
• AFG3-like protein 1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 3110061K15Rik
• 1700047G05Rik

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/114896

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• AFG3-like AAA ATPase 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:1928277

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_054070

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000031967

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.287475

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=603020

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Vamsi K. Mootha, et.al., Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria., Cell, 2003, 115
  http://rdf.ncbi.nlm.nih.gov/pubmed/14651853
• G. Kremmidiotis, et.al., Molecular and functional analyses of the human and mouse genes encoding AFG3L1, a mitochondrial metalloprotease homologous to the human spastic paraplegia protein., Genomics, 2001, 76
  http://rdf.ncbi.nlm.nih.gov/pubmed/11549317
• David J. Pagliarini, et.al., A mitochondrial protein compendium elucidates complex I disease biology., Cell, 2008, 134
  http://rdf.ncbi.nlm.nih.gov/pubmed/18614015
• Mirko. Koppen, et.al., Autocatalytic processing of m-AAA protease subunits in mitochondria., Molecular biology of the cell, 2009, 20
  http://rdf.ncbi.nlm.nih.gov/pubmed/19656850
• Sarah. Ehses, et.al., Regulation of OPA1 processing and mitochondrial fusion by m-AAA protease isoenzymes and OMA1., The Journal of cell biology, 2009, 187
  http://rdf.ncbi.nlm.nih.gov/pubmed/20038678
• Mirko. Koppen, et.al., Variable and tissue-specific subunit composition of mitochondrial m-AAA protease complexes linked to hereditary spastic paraplegia., Molecular and cellular biology, 2007, 27
  http://rdf.ncbi.nlm.nih.gov/pubmed/17101804
• Cristina. García-Frigola, et.al., A collection of cDNAs enriched in upper cortical layers of the embryonic mouse brain., Brain research. Molecular brain research, 2004, 122
  http://rdf.ncbi.nlm.nih.gov/pubmed/15010206
• S. Nishiguchi, et.al., A survey of genes expressed in undifferentiated mouse embryonal carcinoma F9 cells: characterization of low-abundance mRNAs., Journal of biochemistry, 1994, 116
  http://rdf.ncbi.nlm.nih.gov/pubmed/7798170

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• zinc ion binding
  http://purl.obolibrary.org/obo/GO_0008270
• hydrolase activity
  http://purl.obolibrary.org/obo/GO_0016787
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021
• nucleoside-triphosphatase activity
  http://purl.obolibrary.org/obo/GO_0017111
• peptidase activity
  http://purl.obolibrary.org/obo/GO_0008233
• nucleotide binding
  http://purl.obolibrary.org/obo/GO_0000166
• ATP binding
  http://purl.obolibrary.org/obo/GO_0005524
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• protein catabolic process
  http://purl.obolibrary.org/obo/GO_0030163
• metalloendopeptidase activity
  http://purl.obolibrary.org/obo/GO_0004222
• mitochondrion
  http://purl.obolibrary.org/obo/GO_0005739
• proteolysis
  http://purl.obolibrary.org/obo/GO_0006508
• metallopeptidase activity
  http://purl.obolibrary.org/obo/GO_0008237

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName