CD17368

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD17368

CD17368

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Pde6b

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• cGMP-phosphodiesterase beta-subunit
• phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide
• retinal degeneration 1
• rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta
• phosphodiesterase, cGMP, rod receptor, beta polypeptide
• GMP-PDE beta

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Pdeb
• rd1
• rd
• rd10
• r
• rd-1

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/18587

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide
  http://metadb.riken.jp/db/mgi_rdf/MGI:97525

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_008806

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000029491

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.1372

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=180072

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• J E. Womack, et.al., Mitochondrial malate dehydrogenase (Mor-1) in the mouse: linkage to chromosome 5 markers., Biochemical genetics, 1975, 13
  http://rdf.ncbi.nlm.nih.gov/pubmed/1203052
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Jacob. Menzler, et.al., Network oscillations in rod-degenerated mouse retinas., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2011, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/21307264
• J C. Blanks, et.al., An autoradiographic analysis of postnatal cell proliferation in the normal and degenerative mouse retina., The Journal of comparative neurology, 1977, 174
  http://rdf.ncbi.nlm.nih.gov/pubmed/864040
• M M. LaVail, et.al., Role of the pigment epithelium in inherited retinal degeneration analyzed with experimental mouse chimeras., Experimental eye research, 1976, 23
  http://rdf.ncbi.nlm.nih.gov/pubmed/976367
• U C. Dräger, et.al., Studies of visual function and its decay in mice with hereditary retinal degeneration., The Journal of comparative neurology, 1978, 180
  http://rdf.ncbi.nlm.nih.gov/pubmed/649791
• Ayse. Sahaboglu, et.al., PARP1 gene knock-out increases resistance to retinal degeneration without affecting retinal function., PloS one, 2010, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/21124852
• François. Paquet-Durand, et.al., A key role for cyclic nucleotide gated (CNG) channels in cGMP-related retinitis pigmentosa., Human molecular genetics, 2011, 20
  http://rdf.ncbi.nlm.nih.gov/pubmed/21149284
• Emilie. Picard, et.al., Overexpressed or intraperitoneally injected human transferrin prevents photoreceptor degeneration in rd10 mice., Molecular vision, 2010, 16
  http://rdf.ncbi.nlm.nih.gov/pubmed/21179240
• L D. Carter-Dawson, et.al., Differential effect of the rd mutation on rods and cones in the mouse retina., Investigative ophthalmology & visual science, 1978, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/659071

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• phosphoric diester hydrolase activity
  http://purl.obolibrary.org/obo/GO_0008081
• signal transduction
  http://purl.obolibrary.org/obo/GO_0007165
• retina development in camera-type eye
  http://purl.obolibrary.org/obo/GO_0060041
• catalytic activity
  http://purl.obolibrary.org/obo/GO_0003824
• visual perception
  http://purl.obolibrary.org/obo/GO_0007601
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• cytosol
  http://purl.obolibrary.org/obo/GO_0005829
• GMP metabolic process
  http://purl.obolibrary.org/obo/GO_0046037
• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• hydrolase activity
  http://purl.obolibrary.org/obo/GO_0016787
• response to stimulus
  http://purl.obolibrary.org/obo/GO_0050896
• metabolic process
  http://purl.obolibrary.org/obo/GO_0008152
• detection of light stimulus
  http://purl.obolibrary.org/obo/GO_0009583

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00230
• http://www.genome.jp/dbget-bin/www_bget?map04744

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Purine metabolism
• Phototransduction