CD18007

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD18007

CD18007

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Prph2

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• peripherin 2

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• retinal degeneration 2
• peripherin-2
• retinal degeneration slow protein
• retinal degeneration, slow (retinitis pigmentosa 7)
• peripherin 2

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Tspan22
• RP7
• Rds
• rds
• Rd2
• AOFMD
• PRPH
• AVMD
• Nmf193
• Rd-2

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/19133

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• peripherin 2
  http://metadb.riken.jp/db/mgi_rdf/MGI:102791

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_008938

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000023978

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.291370

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=179605

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• P. Démant, et.al., The map position of the rds gene on the 17th chromosome of the mouse., Tissue antigens, 1979, 13
  http://rdf.ncbi.nlm.nih.gov/pubmed/419532
• Dafni. Vlachantoni, et.al., Evidence of severe mitochondrial oxidative stress and a protective effect of low oxygen in mouse models of inherited photoreceptor degeneration., Human molecular genetics, 2011, 20
  http://rdf.ncbi.nlm.nih.gov/pubmed/21051333
• Stylianos. Michalakis, et.al., The glutamic acid-rich protein is a gating inhibitor of cyclic nucleotide-gated channels., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2011, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/21209198
• R M. Robb, Cyclic nucleotide phosphodiesterase activity in normal mice and mice with retinal degeneration., Investigative ophthalmology & visual science, 1979, 18
  http://rdf.ncbi.nlm.nih.gov/pubmed/225287
• G H. Travis, et.al., Complete rescue of photoreceptor dysplasia and degeneration in transgenic retinal degeneration slow (rds) mice., Neuron, 1992, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/1385966
• R. van Nie, et.al., A new H-2-linked mutation, rds, causing retinal degeneration in the mouse., Tissue antigens, 1978, 12
  http://rdf.ncbi.nlm.nih.gov/pubmed/705766
• A. Viczian, et.al., Photoreceptor-specific mRNAs in mice carrying different allelic combinations at the rd and rds loci., Experimental eye research, 1992, 54
  http://rdf.ncbi.nlm.nih.gov/pubmed/1381682
• Dibyendu. Chakraborty, et.al., Differences in RDS trafficking, assembly and function in cones versus rods: insights from studies of C150S-RDS., Human molecular genetics, 2010, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/20858597
• http://rdf.ncbi.nlm.nih.gov/pubmed/21052544
• Xue. Cai, et.al., A 350 bp region of the proximal promoter of Rds drives cell-type specific gene expression., Experimental eye research, 2010, 91
  http://rdf.ncbi.nlm.nih.gov/pubmed/20447394

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• cell adhesion
  http://purl.obolibrary.org/obo/GO_0007155
• visual perception
  http://purl.obolibrary.org/obo/GO_0007601
• retina development in camera-type eye
  http://purl.obolibrary.org/obo/GO_0060041
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021
• membrane
  http://purl.obolibrary.org/obo/GO_0016020

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map05014

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Amyotrophic lateral sclerosis (ALS)