CD18107

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD18107

CD18107

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Lfng

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
• O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
• beta-1,3-N-acetylglucosaminyltransferase lunatic fringe

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• AW061165
• lunatic fringe

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/16848

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
  http://metadb.riken.jp/db/mgi_rdf/MGI:1095413

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_008494

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000029570

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.12834

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=602576

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Ioana. Visan, et.al., Lunatic fringe enhances competition for delta-like Notch ligands but does not overcome defective pre-TCR signaling during thymocyte beta-selection in vivo., Journal of immunology (Baltimore, Md. : 1950), 2010, 185
  http://rdf.ncbi.nlm.nih.gov/pubmed/20844195
• B. Cohen, et.al., Fringe boundaries coincide with Notch-dependent patterning centres in mammals and alter Notch-dependent development in Drosophila., Nature genetics, 1997, 16
  http://rdf.ncbi.nlm.nih.gov/pubmed/9207795
• H. Morsli, et.al., Development of the mouse inner ear and origin of its sensory organs., The Journal of neuroscience : the official journal of the Society for Neuroscience, 1998, 18
  http://rdf.ncbi.nlm.nih.gov/pubmed/9547240
• Yayoi. Shikata, et.al., Ptch1-mediated dosage-dependent action of Shh signaling regulates neural progenitor development at late gestational stages., Developmental biology, 2011, 349
  http://rdf.ncbi.nlm.nih.gov/pubmed/20969845
• Takahiro. Ohyama, et.al., BMP signaling is necessary for patterning the sensory and nonsensory regions of the developing mammalian cochlea., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2010, 30
  http://rdf.ncbi.nlm.nih.gov/pubmed/21068310
• S H. Johnston, et.al., A family of mammalian Fringe genes implicated in boundary determination and the Notch pathway., Development (Cambridge, England), 1997, 124
  http://rdf.ncbi.nlm.nih.gov/pubmed/9187150
• Raquel. Lourenço, et.al., Left-right function of dmrt2 genes is not conserved between zebrafish and mouse., PloS one, 2010, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/21203428
• K. Kusumi, et.al., The mouse pudgy mutation disrupts Delta homologue Dll3 and initiation of early somite boundaries., Nature genetics, 1998, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/9662403
• N. Zhang, et.al., Defects in somite formation in lunatic fringe-deficient mice., Nature, 1998, 394
  http://rdf.ncbi.nlm.nih.gov/pubmed/9690472
• Julie S. Yuan, et.al., Lunatic Fringe prolongs Delta/Notch-induced self-renewal of committed αβ T-cell progenitors., Blood, 2011, 117
  http://rdf.ncbi.nlm.nih.gov/pubmed/21097675

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• compartment pattern specification
  http://purl.obolibrary.org/obo/GO_0007386
• O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity
  http://purl.obolibrary.org/obo/GO_0033829
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• integral component of Golgi membrane
  http://purl.obolibrary.org/obo/GO_0030173
• transferase activity, transferring glycosyl groups
  http://purl.obolibrary.org/obo/GO_0016757
• metabolic process
  http://purl.obolibrary.org/obo/GO_0008152
• female meiotic division
  http://purl.obolibrary.org/obo/GO_0007143
• Golgi apparatus
  http://purl.obolibrary.org/obo/GO_0005794
• transferase activity
  http://purl.obolibrary.org/obo/GO_0016740
• pattern specification process
  http://purl.obolibrary.org/obo/GO_0007389
• ovarian follicle development
  http://purl.obolibrary.org/obo/GO_0001541
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00514
• http://www.genome.jp/dbget-bin/www_bget?map04330

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Other types of O-glycan biosynthesis
• Notch signaling pathway