Brain Transcriptome Database (BrainTx)
トランスクリプトームデータ
CD18460
http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD18460
CD18460(トランスクリプトームデータ)
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CD18460
トランスクリプトームデータ
遺伝子シンボル
http://metadb.riken.jp/db/BrainTx/geneSymbol
Atn1
遺伝子名
http://metadb.riken.jp/db/BrainTx/geneName
atrophin 1
別名
http://metadb.riken.jp/db/BrainTx/alt_name
dentatorubral-pallidoluysian atrophy protein homolog
atrophin 1
dentatorubral pallidoluysian atrophy
別名略称
http://metadb.riken.jp/db/BrainTx/alt_symbol
atrophin-1
Atr1
Drpla
NCBI遺伝子
http://metadb.riken.jp/db/BrainTx/NCBIGene
https://www.ncbi.nlm.nih.gov/gene/13498
MGI遺伝子
http://metadb.riken.jp/db/BrainTx/mgiGene
atrophin 1
http://metadb.riken.jp/db/mgi_rdf/MGI:104725
BrainTx遺伝子
http://metadb.riken.jp/db/BrainTx/brainTxGene
脳発現画像
http://metadb.riken.jp/db/BrainTx/brainExpressionImage
時系列発現 (小脳)
http://metadb.riken.jp/db/BrainTx/brainExpression
脳発現特異性/組織別発現
http://metadb.riken.jp/db/BrainTx/brainSpecificity
BrainTx遺伝子カテゴリー
http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory
NCBI Accession Number
http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber
https://www.ncbi.nlm.nih.gov/nuccore/NM_007881
Ensembl 遺伝子
http://metadb.riken.jp/db/BrainTx/ensemblGene
http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000004263
UniGene 遺伝子
http://metadb.riken.jp/db/BrainTx/uniGene
https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.333380
OMIM ID
http://metadb.riken.jp/db/BrainTx/omim
https://www.omim.org/entry/603434?search=603434&highlight=607462
PubMed ID (PMID)
http://rdf.ncbi.nlm.nih.gov/pubmed/
Yiguo. Shen, et.al., Functional architecture of atrophins., The Journal of biological chemistry, 2007, 282
http://rdf.ncbi.nlm.nih.gov/pubmed/17150957
Roland H. Friedel, et.al., EUCOMM--the European conditional mouse mutagenesis program., Briefings in functional genomics & proteomics, 2007, 6
http://rdf.ncbi.nlm.nih.gov/pubmed/17967808
M A. Ansari-Lari, et.al., Comparative sequence analysis of a gene-rich cluster at human chromosome 12p13 and its syntenic region in mouse chromosome 6., Genome research, 1998, 8
http://rdf.ncbi.nlm.nih.gov/pubmed/9445485
M. Oyake, et.al., Molecular cloning of murine homologue dentatorubral-pallidoluysian atrophy (DRPLA) cDNA: strong conservation of a polymorphic CAG repeat in the murine gene., Genomics, 1997, 40
http://rdf.ncbi.nlm.nih.gov/pubmed/9070948
O. Onodera, et.al., Molecular cloning of a full-length cDNA for dentatorubral-pallidoluysian atrophy and regional expressions of the expanded alleles in the CNS., American journal of human genetics, 1995, 57
http://rdf.ncbi.nlm.nih.gov/pubmed/7485154
Chun-Li. Zhang, et.al., Nuclear receptor TLX prevents retinal dystrophy and recruits the corepressor atrophin1., Genes & development, 2006, 20
http://rdf.ncbi.nlm.nih.gov/pubmed/16702404
Rong. Hou, et.al., Atrophin proteins interact with the Fat1 cadherin and regulate migration and orientation in vascular smooth muscle cells., The Journal of biological chemistry, 2009, 284
http://rdf.ncbi.nlm.nih.gov/pubmed/19131340
Juehua. Yu, et.al., C-terminal deletion of the atrophin-1 protein results in growth retardation but not neurodegeneration in mice., Developmental dynamics : an official publication of the American Association of Anatomists, 2009, 238
http://rdf.ncbi.nlm.nih.gov/pubmed/19681162
G. Schilling, et.al., Nuclear accumulation of truncated atrophin-1 fragments in a transgenic mouse model of DRPLA., Neuron, 1999, 24
http://rdf.ncbi.nlm.nih.gov/pubmed/10677044
T. Sato, et.al., Transgenic mice harboring a full-length human mutant DRPLA gene exhibit age-dependent intergenerational and somatic instabilities of CAG repeats comparable with those in DRPLA patients., Human molecular genetics, 1999, 8
http://rdf.ncbi.nlm.nih.gov/pubmed/9887337
Gene Ontology
http://metadb.riken.jp/db/BrainTx/golink
protein binding
http://purl.obolibrary.org/obo/GO_0005515
cytoplasm
http://purl.obolibrary.org/obo/GO_0005737
transcription corepressor activity
http://purl.obolibrary.org/obo/GO_0003714
neuron apoptotic process
http://purl.obolibrary.org/obo/GO_0051402
cell junction
http://purl.obolibrary.org/obo/GO_0030054
nuclear matrix
http://purl.obolibrary.org/obo/GO_0016363
nucleus
http://purl.obolibrary.org/obo/GO_0005634
cell leading edge
http://purl.obolibrary.org/obo/GO_0031252
cell migration
http://purl.obolibrary.org/obo/GO_0016477
toxin metabolic process
http://purl.obolibrary.org/obo/GO_0009404
protein domain specific binding
http://purl.obolibrary.org/obo/GO_0019904
regulation of neuron differentiation
http://purl.obolibrary.org/obo/GO_0045664
JUN kinase binding
http://purl.obolibrary.org/obo/GO_0008432
perinuclear region of cytoplasm
http://purl.obolibrary.org/obo/GO_0048471
negative regulation of transcription from RNA polymerase II promoter
http://purl.obolibrary.org/obo/GO_0000122
http://purl.obolibrary.org/obo/GO_0090729
regulation of RNA biosynthetic process
http://purl.obolibrary.org/obo/GO_2001141
regulation of transcription, DNA-templated
http://purl.obolibrary.org/obo/GO_0006355
transcription, DNA-templated
http://purl.obolibrary.org/obo/GO_0006351
maintenance of cell polarity
http://purl.obolibrary.org/obo/GO_0030011
InterPro ID
http://metadb.riken.jp/db/BrainTx/interPro
KEGG Pathway ID
http://metadb.riken.jp/db/BrainTx/keggPathwayID
KEGG Pathway 名称
http://metadb.riken.jp/db/BrainTx/keggPathwayName
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