CD18608

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD18608

CD18608

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Hs3st3b1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• heparan sulfate 3-O-sulfotransferase 3B1
• heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
• heparan sulfate glucosamine 3-O-sulfotransferase 3B1
• heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3B1
• D-glycosaminyl 3-O-sulfotransferase-3B

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 3OST3B1
• 3-OST-3B
• 3Ost3b
• AW536289
• Hs3st3b
• HS3ST3B1
• AU041882
• m3-OST-3B

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/54710

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
  http://metadb.riken.jp/db/mgi_rdf/MGI:1333853

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_018805

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000070407

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.274426

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=604058

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• N W. Shworak, et.al., Multiple isoforms of heparan sulfate D-glucosaminyl 3-O-sulfotransferase. Isolation, characterization, and expression of human cdnas and identification of distinct genomic loci., The Journal of biological chemistry, 1999, 274
  http://rdf.ncbi.nlm.nih.gov/pubmed/9988767
• D. Shukla, et.al., A novel role for 3-O-sulfated heparan sulfate in herpes simplex virus 1 entry., Cell, 1999, 99
  http://rdf.ncbi.nlm.nih.gov/pubmed/10520990
• Han Sheng. Chiu, et.al., Comparative gene expression analysis of genital tubercle development reveals a putative appendicular Wnt7 network for the epidermal differentiation., Developmental biology, 2010, 344
  http://rdf.ncbi.nlm.nih.gov/pubmed/20510229
• Susan. Magdaleno, et.al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system., PLoS biology, 2006, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/16602821
• Tomio. Yabe, et.al., Developmental and regional expression of heparan sulfate sulfotransferase genes in the mouse brain., Glycobiology, 2005, 15
  http://rdf.ncbi.nlm.nih.gov/pubmed/15944372

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• transferase activity
  http://purl.obolibrary.org/obo/GO_0016740
• protein sulfation
  http://purl.obolibrary.org/obo/GO_0006477
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021
• [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity
  http://purl.obolibrary.org/obo/GO_0008467
• sulfotransferase activity
  http://purl.obolibrary.org/obo/GO_0008146
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• integral component of plasma membrane
  http://purl.obolibrary.org/obo/GO_0005887
• Golgi apparatus
  http://purl.obolibrary.org/obo/GO_0005794
• metabolic process
  http://purl.obolibrary.org/obo/GO_0008152
• [heparan sulfate]-glucosamine 3-sulfotransferase 3 activity
  http://purl.obolibrary.org/obo/GO_0033872

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00534

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Glycosaminoglycan biosynthesis - heparan sulfate