CD18686

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD18686

CD18686

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Slc5a7

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• solute carrier family 5 (choline transporter), member 7

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• solute carrier family 5 (choline transporter), member 7
• CHT
• hemicholinium-3-sensitive choline transporter
• solute carrier family 5 member 7
• high affinity choline transporter 1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• CHT1

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/63993

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• solute carrier family 5 (choline transporter), member 7
  http://metadb.riken.jp/db/mgi_rdf/MGI:1927126

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_022025

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000023945

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.155241

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=608761

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Zilai. Wang, et.al., Presynaptic and postsynaptic interaction of the amyloid precursor protein promotes peripheral and central synaptogenesis., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2009, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/19726636
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Takashi. Okuda, et.al., Single nucleotide polymorphism of the human high affinity choline transporter alters transport rate., The Journal of biological chemistry, 2002, 277
  http://rdf.ncbi.nlm.nih.gov/pubmed/12237312
• Brett A. English, et.al., Tachycardia, reduced vagal capacity, and age-dependent ventricular dysfunction arising from diminished expression of the presynaptic choline transporter., American journal of physiology. Heart and circulatory physiology, 2010, 299
  http://rdf.ncbi.nlm.nih.gov/pubmed/20601463
• D. Lund, et.al., Motor neuron-specific overexpression of the presynaptic choline transporter: impact on motor endurance and evoked muscle activity., Neuroscience, 2010, 171
  http://rdf.ncbi.nlm.nih.gov/pubmed/20888396
• Lydie. Guermonprez, et.al., The neuronal choline transporter CHT1 is regulated by immunosuppressor-sensitive pathways., Journal of neurochemistry, 2002, 82
  http://rdf.ncbi.nlm.nih.gov/pubmed/12358793
• Kriste E. Marshall, et.al., In silico discovery of gene-coding variants in murine quantitative trait loci using strain-specific genome sequence databases., Genome biology, 2002, 3
  http://rdf.ncbi.nlm.nih.gov/pubmed/12537567
• Y. Wang, et.al., Molecular cloning of a cDNA for a putative choline co-transporter from Limulus CNS., Gene, 2001, 268
  http://rdf.ncbi.nlm.nih.gov/pubmed/11368908
• S. Apparsundaram, et.al., Molecular cloning and characterization of a murine hemicholinium-3-sensitive choline transporter., Biochemical Society transactions, 2001, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/11709061
• Braulio M. de Castro, et.al., The vesicular acetylcholine transporter is required for neuromuscular development and function., Molecular and cellular biology, 2009, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/19635813

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• transmembrane transport
  http://purl.obolibrary.org/obo/GO_0055085
• ion transport
  http://purl.obolibrary.org/obo/GO_0006811
• choline transport
  http://purl.obolibrary.org/obo/GO_0015871
• symporter activity
  http://purl.obolibrary.org/obo/GO_0015293
• sodium ion transport
  http://purl.obolibrary.org/obo/GO_0006814
• synaptic transmission, cholinergic
  http://purl.obolibrary.org/obo/GO_0007271
• transport
  http://purl.obolibrary.org/obo/GO_0006810
• neurotransmitter biosynthetic process
  http://purl.obolibrary.org/obo/GO_0042136
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• plasma membrane
  http://purl.obolibrary.org/obo/GO_0005886
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021
• choline:sodium symporter activity
  http://purl.obolibrary.org/obo/GO_0005307
• neuromuscular synaptic transmission
  http://purl.obolibrary.org/obo/GO_0007274
• choline transmembrane transporter activity
  http://purl.obolibrary.org/obo/GO_0015220
• acetylcholine biosynthetic process
  http://purl.obolibrary.org/obo/GO_0008292
• transporter activity
  http://purl.obolibrary.org/obo/GO_0005215

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04725

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Cholinergic synapse