CD18760

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD18760

CD18760

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Tdrd1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• tudor domain containing 1

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• tudor domain-containing protein 1
• tudor domain containing 1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• MTR-1

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/83561

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• tudor domain containing 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:1933218

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001002241
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001002240
• https://www.ncbi.nlm.nih.gov/nuccore/NM_031387
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001002238

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000025081

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.247541

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=605796

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Josephine. Bowles, et.al., FGF9 suppresses meiosis and promotes male germ cell fate in mice., Developmental cell, 2010, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/20833365
• Jieyan. Pan, et.al., RNF17, a component of the mammalian germ cell nuage, is essential for spermiogenesis., Development (Cambridge, England), 2005, 132
  http://rdf.ncbi.nlm.nih.gov/pubmed/16093322
• Shinichiro. Chuma, et.al., Tdrd1/Mtr-1, a tudor-related gene, is essential for male germ-cell differentiation and nuage/germinal granule formation in mice., Proceedings of the National Academy of Sciences of the United States of America, 2006, 103
  http://rdf.ncbi.nlm.nih.gov/pubmed/17038506
• P J. Wang, et.al., An abundance of X-linked genes expressed in spermatogonia., Nature genetics, 2001, 27
  http://rdf.ncbi.nlm.nih.gov/pubmed/11279525
• Yael. Costa, et.al., Mouse MAELSTROM: the link between meiotic silencing of unsynapsed chromatin and microRNA pathway?, Human molecular genetics, 2006, 15
  http://rdf.ncbi.nlm.nih.gov/pubmed/16787967
• Alexei A. Aravin, et.al., Cytoplasmic compartmentalization of the fetal piRNA pathway in mice., PLoS genetics, 2009, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/20011505
• Masanobu. Shoji, et.al., The TDRD9-MIWI2 complex is essential for piRNA-mediated retrotransposon silencing in the mouse male germline., Developmental cell, 2009, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/20059948
• Satomi. Kuramochi-Miyagawa, et.al., MVH in piRNA processing and gene silencing of retrotransposons., Genes & development, 2010, 24
  http://rdf.ncbi.nlm.nih.gov/pubmed/20439430
• Shinichiro. Chuma, et.al., Mouse Tudor Repeat-1 (MTR-1) is a novel component of chromatoid bodies/nuages in male germ cells and forms a complex with snRNPs., Mechanisms of development, 2003, 120
  http://rdf.ncbi.nlm.nih.gov/pubmed/14550528
• Atsushi. Suzuki, et.al., NANOS2 interacts with the CCR4-NOT deadenylation complex and leads to suppression of specific RNAs., Proceedings of the National Academy of Sciences of the United States of America, 2010, 107
  http://rdf.ncbi.nlm.nih.gov/pubmed/20133598

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• zinc ion binding
  http://purl.obolibrary.org/obo/GO_0008270
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• spermatogenesis
  http://purl.obolibrary.org/obo/GO_0007283
• DNA methylation involved in gamete generation
  http://purl.obolibrary.org/obo/GO_0043046
• pi-body
  http://purl.obolibrary.org/obo/GO_0071546
• germ cell development
  http://purl.obolibrary.org/obo/GO_0007281
• http://purl.obolibrary.org/obo/GO_1990904
• P granule
  http://purl.obolibrary.org/obo/GO_0043186
• piRNA metabolic process
  http://purl.obolibrary.org/obo/GO_0034587
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• meiotic cell cycle
  http://purl.obolibrary.org/obo/GO_0051321
• chromatoid body
  http://purl.obolibrary.org/obo/GO_0033391
• gene silencing by RNA
  http://purl.obolibrary.org/obo/GO_0031047
• cell differentiation
  http://purl.obolibrary.org/obo/GO_0030154

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName