CD18988

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD18988

CD18988

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Vax1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• ventral anterior homeobox containing gene 1

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• ventral anterior homeobox 1
• ventral anterior homeobox containing gene 1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/22326

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• ventral anterior homeobox 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:1277163

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_009501

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000006270

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.23801

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=604294

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Ke. Tang, et.al., COUP-TFs regulate eye development by controlling factors essential for optic vesicle morphogenesis., Development (Cambridge, England), 2010, 137
  http://rdf.ncbi.nlm.nih.gov/pubmed/20147377
• D. Jean, et.al., Six6 (Optx2) is a novel murine Six3-related homeobox gene that demarcates the presumptive pituitary/hypothalamic axis and the ventral optic stalk., Mechanisms of development, 1999, 84
  http://rdf.ncbi.nlm.nih.gov/pubmed/10473118
• S. Bertuzzi, et.al., The homeodomain protein vax1 is required for axon guidance and major tract formation in the developing forebrain., Genes & development, 1999, 13
  http://rdf.ncbi.nlm.nih.gov/pubmed/10601035
• M. Hallonet, et.al., Vax1, a novel homeobox-containing gene, directs development of the basal forebrain and visual system., Genes & development, 1999, 13
  http://rdf.ncbi.nlm.nih.gov/pubmed/10601036
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• K. Ohsaki, et.al., Expression of the Vax family homeobox genes suggests multiple roles in eye development., Genes to cells : devoted to molecular & cellular mechanisms, 1999, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/10421837
• http://rdf.ncbi.nlm.nih.gov/pubmed/19854269
• M. Hallonet, et.al., Vax1 is a novel homeobox-containing gene expressed in the developing anterior ventral forebrain., Development (Cambridge, England), 1998, 125
  http://rdf.ncbi.nlm.nih.gov/pubmed/9636075
• Kapil. Bharti, et.al., Lack of the ventral anterior homeodomain transcription factor VAX1 leads to induction of a second pituitary., Development (Cambridge, England), 2011, 138
  http://rdf.ncbi.nlm.nih.gov/pubmed/21247964
• Tomomi. Shimogori, et.al., A genomic atlas of mouse hypothalamic development., Nature neuroscience, 2010, 13
  http://rdf.ncbi.nlm.nih.gov/pubmed/20436479

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• sequence-specific DNA binding transcription factor activity
  http://purl.obolibrary.org/obo/GO_0003700
• nervous system development
  http://purl.obolibrary.org/obo/GO_0007399
• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677
• camera-type eye development
  http://purl.obolibrary.org/obo/GO_0043010
• central nervous system development
  http://purl.obolibrary.org/obo/GO_0007417
• sequence-specific DNA binding
  http://purl.obolibrary.org/obo/GO_0043565
• neuron migration
  http://purl.obolibrary.org/obo/GO_0001764
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• cell differentiation
  http://purl.obolibrary.org/obo/GO_0030154
• transcription regulatory region sequence-specific DNA binding
  http://purl.obolibrary.org/obo/GO_0000976
• negative regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0000122
• chromatin DNA binding
  http://purl.obolibrary.org/obo/GO_0031490
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• axon guidance
  http://purl.obolibrary.org/obo/GO_0007411
• negative regulation of neuroblast proliferation
  http://purl.obolibrary.org/obo/GO_0007406
• brain development
  http://purl.obolibrary.org/obo/GO_0007420

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName