CD19355

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD19355

CD19355

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Lhx6

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• LIM homeobox protein 6

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• LIM/homeobox protein Lhx6.1
• LIM/homeobox protein Lhx6
• LIM homeobox protein 6
• LIM-homeodomain protein 6.1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Lhx6.1

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/16874

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• LIM homeobox protein 6
  http://metadb.riken.jp/db/mgi_rdf/MGI:1306803

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001083126
• https://www.ncbi.nlm.nih.gov/nuccore/NM_008500
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001083127
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001083125

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000026890

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.12881

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=608215

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• A. Trumpp, et.al., Cre-mediated gene inactivation demonstrates that FGF8 is required for cell survival and patterning of the first branchial arch., Genes & development, 1999, 13
  http://rdf.ncbi.nlm.nih.gov/pubmed/10601039
• Alessandro. Sessa, et.al., Tbr2-positive intermediate (basal) neuronal progenitors safeguard cerebral cortex expansion by controlling amplification of pallial glutamatergic neurons and attraction of subpallial GABAergic interneurons., Genes & development, 2010, 24
  http://rdf.ncbi.nlm.nih.gov/pubmed/20713522
• Paul. Gibson, et.al., Subtypes of medulloblastoma have distinct developmental origins., Nature, 2010, 468
  http://rdf.ncbi.nlm.nih.gov/pubmed/21150899
• Li. Chen, et.al., The mouse homeobox gene Gbx2 is required for the development of cholinergic interneurons in the striatum., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2010, 30
  http://rdf.ncbi.nlm.nih.gov/pubmed/21048141
• A S. Tucker, et.al., Fgf-8 determines rostral-caudal polarity in the first branchial arch., Development (Cambridge, England), 1999, 126
  http://rdf.ncbi.nlm.nih.gov/pubmed/9834185
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• http://rdf.ncbi.nlm.nih.gov/pubmed/20932939
• N. Kimura, et.al., A brain region-specific gene product Lhx6.1 interacts with Ldb1 through tandem LIM-domains., Journal of biochemistry, 1999, 126
  http://rdf.ncbi.nlm.nih.gov/pubmed/10393337
• L. Sussel, et.al., Loss of Nkx2.1 homeobox gene function results in a ventral to dorsal molecular respecification within the basal telencephalon: evidence for a transformation of the pallidum into the striatum., Development (Cambridge, England), 1999, 126
  http://rdf.ncbi.nlm.nih.gov/pubmed/10393115
• M. Grigoriou, et.al., Expression and regulation of Lhx6 and Lhx7, a novel subfamily of LIM homeodomain encoding genes, suggests a role in mammalian head development., Development (Cambridge, England), 1998, 125
  http://rdf.ncbi.nlm.nih.gov/pubmed/9570771

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• zinc ion binding
  http://purl.obolibrary.org/obo/GO_0008270
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• cerebral cortex neuron differentiation
  http://purl.obolibrary.org/obo/GO_0021895
• forebrain neuron development
  http://purl.obolibrary.org/obo/GO_0021884
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• cerebral cortex tangential migration
  http://purl.obolibrary.org/obo/GO_0021800
• cell differentiation
  http://purl.obolibrary.org/obo/GO_0030154
• cell maturation
  http://purl.obolibrary.org/obo/GO_0048469
• cerebral cortex GABAergic interneuron migration
  http://purl.obolibrary.org/obo/GO_0021853
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• sequence-specific DNA binding transcription factor activity
  http://purl.obolibrary.org/obo/GO_0003700
• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677
• forebrain neuron fate commitment
  http://purl.obolibrary.org/obo/GO_0021877
• sequence-specific DNA binding
  http://purl.obolibrary.org/obo/GO_0043565
• nervous system development
  http://purl.obolibrary.org/obo/GO_0007399
• cerebral cortex radially oriented cell migration
  http://purl.obolibrary.org/obo/GO_0021799

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName