CD19911

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD19911

CD19911

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Skp1a

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• S-phase kinase-associated protein 1A

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• cyclin A/CDK2-associated protein p19
• cyclin-A/CDK2-associated protein p19
• S-phase kinase-associated protein 1
• S-phase kinase-associated protein 1A

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 2610206H23Rik
• 2610043E24Rik
• p19A
• 15kDa
• OCP2
• Tceb1l
• OCP-II
• EMC19
• SKP1
• p19Skp1

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/21402

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• S-phase kinase-associated protein 1A
  http://metadb.riken.jp/db/mgi_rdf/MGI:103575

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_011543

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000036309

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.42944

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=601434

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• J. Sowden, et.al., A novel cDNA with homology to an RNA polymerase II elongation factor maps to human chromosome 5q31 (TCEB1L) and to mouse chromosome 11 (Tceb1l)., Genomics, 1995, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/8530064
• I. Bach, et.al., Cloning of human hepatic nuclear factor 1 (HNF1) and chromosomal localization of its gene in man and mouse., Genomics, 1990, 8
  http://rdf.ncbi.nlm.nih.gov/pubmed/1707031
• J C. Sowden, et.al., The identification of novel sequences expressed in the mouse notochord., Mammalian genome : official journal of the International Mammalian Genome Society, 1997, 8
  http://rdf.ncbi.nlm.nih.gov/pubmed/9021147
• S. Hatakeyama, et.al., Ubiquitin-dependent degradation of IkappaBalpha is mediated by a ubiquitin ligase Skp1/Cul 1/F-box protein FWD1., Proceedings of the National Academy of Sciences of the United States of America, 1999, 96
  http://rdf.ncbi.nlm.nih.gov/pubmed/10097128
• Guoji. Guo, et.al., Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst., Developmental cell, 2010, 18
  http://rdf.ncbi.nlm.nih.gov/pubmed/20412781
• K A. Brown, et.al., Human sequences homologous to the gene for the cochlear protein Ocp-II do not map to currently known non-syndromic hearing loss loci., Annals of human genetics, 1996, 60
  http://rdf.ncbi.nlm.nih.gov/pubmed/8912791
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Tali. Fishman-Jacob, et.al., A sporadic Parkinson disease model via silencing of the ubiquitin-proteasome/E3 ligase component SKP1A., The Journal of biological chemistry, 2009, 284
  http://rdf.ncbi.nlm.nih.gov/pubmed/19748892
• Carmen. Sánchez, et.al., Proteomics analysis of Ring1B/Rnf2 interactors identifies a novel complex with the Fbxl10/Jhdm1B histone demethylase and the Bcl6 interacting corepressor., Molecular & cellular proteomics : MCP, 2007, 6
  http://rdf.ncbi.nlm.nih.gov/pubmed/17296600
• Ikuko. Yao, et.al., SCRAPPER-dependent ubiquitination of active zone protein RIM1 regulates synaptic vesicle release., Cell, 2007, 130
  http://rdf.ncbi.nlm.nih.gov/pubmed/17803915

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• histone H2A monoubiquitination
  http://purl.obolibrary.org/obo/GO_0035518
• protein ubiquitination
  http://purl.obolibrary.org/obo/GO_0016567
• phosphorylation
  http://purl.obolibrary.org/obo/GO_0016310
• ubiquitin-dependent protein catabolic process
  http://purl.obolibrary.org/obo/GO_0006511
• kinase activity
  http://purl.obolibrary.org/obo/GO_0016301
• SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
  http://purl.obolibrary.org/obo/GO_0031146
• SCF ubiquitin ligase complex
  http://purl.obolibrary.org/obo/GO_0019005
• cytosol
  http://purl.obolibrary.org/obo/GO_0005829

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04110
• http://www.genome.jp/dbget-bin/www_bget?map04350
• http://www.genome.jp/dbget-bin/www_bget?map04120
• http://www.genome.jp/dbget-bin/www_bget?map04114
• http://www.genome.jp/dbget-bin/www_bget?map04710
• http://www.genome.jp/dbget-bin/www_bget?map05168
• http://www.genome.jp/dbget-bin/www_bget?map04310
• http://www.genome.jp/dbget-bin/www_bget?map04141

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Herpes simplex infection
• Circadian rhythm - mammal
• Ubiquitin mediated proteolysis
• Protein processing in endoplasmic reticulum
• Oocyte meiosis
• TGF-beta signaling pathway
• Wnt signaling pathway
• Cell cycle