CD20491

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD20491

CD20491

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Supt5h

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• suppressor of Ty 5 homolog (S. cerevisiae)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• DSIF large subunit
• suppressor of Ty 5 homolog (S. cerevisiae)
• DRB sensitivity-inducing factor large subunit
• transcription elongation factor SPT5

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• AU019549
• Spt5
• AL033321
• AL033283

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/20924

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• suppressor of Ty 5
  http://metadb.riken.jp/db/mgi_rdf/MGI:1202400

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_013676

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000003435

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.285906

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=602102

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
• P W. Chiang, et.al., Isolation of murine SPT5 homologue: completion of the isolation and characterization of human and murine homologues of yeast chromatin structural protein complex SPT4, SPT5, and SPT6., Genomics, 1998, 47
  http://rdf.ncbi.nlm.nih.gov/pubmed/9480761
• Shigetoshi. Yokoyama, et.al., A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58., Developmental cell, 2009, 17
  http://rdf.ncbi.nlm.nih.gov/pubmed/20059953
• K. Kusumi, et.al., The mouse pudgy mutation disrupts Delta homologue Dll3 and initiation of early somite boundaries., Nature genetics, 1998, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/9662403
• Rushad. Pavri, et.al., Activation-induced cytidine deaminase targets DNA at sites of RNA polymerase II stalling by interaction with Spt5., Cell, 2010, 143
  http://rdf.ncbi.nlm.nih.gov/pubmed/20887897
• Shetal A. Patel, et.al., Functional analysis of the Cdk7.cyclin H.Mat1 complex in mouse embryonic stem cells and embryos., The Journal of biological chemistry, 2010, 285
  http://rdf.ncbi.nlm.nih.gov/pubmed/20231280
• Terri L. Petkau, et.al., Progranulin expression in the developing and adult murine brain., The Journal of comparative neurology, 2010, 518
  http://rdf.ncbi.nlm.nih.gov/pubmed/20737593

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• negative regulation of DNA-templated transcription, elongation
  http://purl.obolibrary.org/obo/GO_0032785
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• protein heterodimerization activity
  http://purl.obolibrary.org/obo/GO_0046982
• positive regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0045944
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• regulation of DNA-templated transcription, elongation
  http://purl.obolibrary.org/obo/GO_0032784
• transcription elongation from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0006368
• enzyme binding
  http://purl.obolibrary.org/obo/GO_0019899
• negative regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0000122
• regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0006357
• positive regulation of DNA-templated transcription, elongation
  http://purl.obolibrary.org/obo/GO_0032786
• DNA-templated transcription, elongation
  http://purl.obolibrary.org/obo/GO_0006354
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• positive regulation of transcription elongation from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0032968

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName