CD20794

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD20794

CD20794

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Smyd2

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• SET and MYND domain containing 2

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• histone methyltransferase SMYD2
• N-lysine methyltransferase SMYD2
• SET and MYND domain containing 2
• SET and MYND domain-containing protein 2

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 4930402C15
• Zmynd14
• KMT3C
• 1110020E07Rik

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/226830

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• SET and MYND domain containing 2
  http://metadb.riken.jp/db/mgi_rdf/MGI:1915889

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_026796

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000026603

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.156895

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=610663

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• C David. Allis, et.al., New nomenclature for chromatin-modifying enzymes., Cell, 2007, 131
  http://rdf.ncbi.nlm.nih.gov/pubmed/18022353
• Roland H. Friedel, et.al., EUCOMM--the European conditional mouse mutagenesis program., Briefings in functional genomics & proteomics, 2007, 6
  http://rdf.ncbi.nlm.nih.gov/pubmed/17967808
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Jing. Huang, et.al., Repression of p53 activity by Smyd2-mediated methylation., Nature, 2006, 444
  http://rdf.ncbi.nlm.nih.gov/pubmed/17108971
• Mark A. Brown, et.al., Identification and characterization of Smyd2: a split SET/MYND domain-containing histone H3 lysine 36-specific methyltransferase that interacts with the Sin3 histone deacetylase complex., Molecular cancer, 2006, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/16805913
• Florian. Diehl, et.al., Cardiac deletion of Smyd2 is dispensable for mouse heart development., PloS one, 2010, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/20305823

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• covalent chromatin modification
  http://purl.obolibrary.org/obo/GO_0016569
• RNA polymerase II core binding
  http://purl.obolibrary.org/obo/GO_0000993
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• peptidyl-lysine dimethylation
  http://purl.obolibrary.org/obo/GO_0018027
• methyltransferase activity
  http://purl.obolibrary.org/obo/GO_0008168
• peptidyl-lysine monomethylation
  http://purl.obolibrary.org/obo/GO_0018026
• methylation
  http://purl.obolibrary.org/obo/GO_0032259
• transferase activity
  http://purl.obolibrary.org/obo/GO_0016740
• cytosol
  http://purl.obolibrary.org/obo/GO_0005829
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• histone H3-K36 methylation
  http://purl.obolibrary.org/obo/GO_0010452
• chromatin organization
  http://purl.obolibrary.org/obo/GO_0006325
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• histone methyltransferase activity (H3-K36 specific)
  http://purl.obolibrary.org/obo/GO_0046975
• regulation of DNA damage response, signal transduction by p53 class mediator
  http://purl.obolibrary.org/obo/GO_0043516
• protein-lysine N-methyltransferase activity
  http://purl.obolibrary.org/obo/GO_0016279
• p53 binding
  http://purl.obolibrary.org/obo/GO_0002039
• negative regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0000122
• zinc ion binding
  http://purl.obolibrary.org/obo/GO_0008270
• histone-lysine N-methyltransferase activity
  http://purl.obolibrary.org/obo/GO_0018024
• binding
  http://purl.obolibrary.org/obo/GO_0005488
• negative regulation of cell proliferation
  http://purl.obolibrary.org/obo/GO_0008285
• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName