CD21372

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD21372

CD21372

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Acsm3

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• acyl-CoA synthetase medium-chain family member 3

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• butyryl-coenzyme A synthetase 3
• SA hypertension-associated homolog
• middle-chain acyl-CoA synthetase 3
• protein SA homolog
• butyrate--CoA ligase 3
• acyl-CoA synthetase medium-chain family member 3
• acyl-coenzyme A synthetase ACSM3, mitochondrial
• butyryl coenzyme A synthetase 3

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Sa
• Sah

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/20216

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• acyl-CoA synthetase medium-chain family member 3
  http://metadb.riken.jp/db/mgi_rdf/MGI:99538

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_212442
• https://www.ncbi.nlm.nih.gov/nuccore/NM_016870
• https://www.ncbi.nlm.nih.gov/nuccore/NM_212441

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000030935

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.334199

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=145505

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• M. Takenaka, et.al., Isolation of genes identified in mouse renal proximal tubule by comparing different gene expression profiles., Kidney international, 1998, 53
  http://rdf.ncbi.nlm.nih.gov/pubmed/9507200
• D. Karan, et.al., Molecular evolution of the AMP-forming Acetyl-CoA synthetase., Gene, 2001, 265
  http://rdf.ncbi.nlm.nih.gov/pubmed/11255012
• David J. Pagliarini, et.al., A mitochondrial protein compendium elucidates complex I disease biology., Cell, 2008, 134
  http://rdf.ncbi.nlm.nih.gov/pubmed/18614015
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Vamsi K. Mootha, et.al., Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria., Cell, 2003, 115
  http://rdf.ncbi.nlm.nih.gov/pubmed/14651853
• T. Fujino, et.al., Molecular identification and characterization of two medium-chain acyl-CoA synthetases, MACS1 and the Sa gene product., The Journal of biological chemistry, 2001, 276
  http://rdf.ncbi.nlm.nih.gov/pubmed/11470804
• Vanessa. Walsh, et.al., Analysis of the role of the SA gene in blood pressure regulation by gene targeting., Hypertension (Dallas, Tex. : 1979), 2003, 41
  http://rdf.ncbi.nlm.nih.gov/pubmed/12707288
• Cristina. Aresté, et.al., Sex steroid regulation and identification of different transcription units of the SA gene in mouse kidney., The Journal of endocrinology, 2004, 183
  http://rdf.ncbi.nlm.nih.gov/pubmed/15525578
• Y P. Ding, et.al., Genetic maps of polymorphic DNA loci on rat chromosome 1., Genomics, 1996, 36
  http://rdf.ncbi.nlm.nih.gov/pubmed/8812459

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• metabolic process
  http://purl.obolibrary.org/obo/GO_0008152
• butyrate-CoA ligase activity
  http://purl.obolibrary.org/obo/GO_0047760
• fatty acid ligase activity
  http://purl.obolibrary.org/obo/GO_0015645
• fatty acid biosynthetic process
  http://purl.obolibrary.org/obo/GO_0006633
• nucleotide binding
  http://purl.obolibrary.org/obo/GO_0000166
• ATP binding
  http://purl.obolibrary.org/obo/GO_0005524
• mitochondrion
  http://purl.obolibrary.org/obo/GO_0005739
• lipid metabolic process
  http://purl.obolibrary.org/obo/GO_0006629
• mitochondrial matrix
  http://purl.obolibrary.org/obo/GO_0005759
• catalytic activity
  http://purl.obolibrary.org/obo/GO_0003824
• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• ligase activity
  http://purl.obolibrary.org/obo/GO_0016874
• fatty acid metabolic process
  http://purl.obolibrary.org/obo/GO_0006631

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00650
• http://www.genome.jp/dbget-bin/www_bget?map01100

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Metabolic pathways
• Butanoate metabolism