CD21638

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD21638

CD21638

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Capn8

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• calpain 8

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• stomach-specific M-type calpain
• calpain 8
• calpain-8
• stomach-specific calpain (nCL-2)
• new calpain 2

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• nCL-2
• nCL-2'

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/170725

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• calpain 8
  http://metadb.riken.jp/db/mgi_rdf/MGI:2181366

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_130890
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001145806

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000038599

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.189201

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• S. Hata, et.al., Both the conserved and the unique gene structure of stomach-specific calpains reveal processes of calpain gene evolution., Journal of molecular evolution, 2001, 53
  http://rdf.ncbi.nlm.nih.gov/pubmed/11523006
• Shoji. Hata, et.al., Stomach-specific calpain, nCL-2, localizes in mucus cells and proteolyzes the beta-subunit of coatomer complex, beta-COP., The Journal of biological chemistry, 2006, 281
  http://rdf.ncbi.nlm.nih.gov/pubmed/16476741
• Shoji. Hata, et.al., Stomach-specific calpain, nCL-2/calpain 8, is active without calpain regulatory subunit and oligomerizes through C2-like domains., The Journal of biological chemistry, 2007, 282
  http://rdf.ncbi.nlm.nih.gov/pubmed/17646163
• Shoji. Hata, et.al., Calpain 8/nCL-2 and calpain 9/nCL-4 constitute an active protease complex, G-calpain, involved in gastric mucosal defense., PLoS genetics, 2010, 6
  http://rdf.ncbi.nlm.nih.gov/pubmed/20686710
• Alison H. Harrill, et.al., Mouse population-guided resequencing reveals that variants in CD44 contribute to acetaminophen-induced liver injury in humans., Genome research, 2009, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/19416960

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• intracellular
  http://purl.obolibrary.org/obo/GO_0005622
• hydrolase activity
  http://purl.obolibrary.org/obo/GO_0016787
• proteolysis
  http://purl.obolibrary.org/obo/GO_0006508
• cysteine-type peptidase activity
  http://purl.obolibrary.org/obo/GO_0008234
• cysteine-type endopeptidase activity
  http://purl.obolibrary.org/obo/GO_0004197
• calcium ion binding
  http://purl.obolibrary.org/obo/GO_0005509
• cytoplasm
  http://purl.obolibrary.org/obo/GO_0005737
• Golgi apparatus
  http://purl.obolibrary.org/obo/GO_0005794
• peptidase activity
  http://purl.obolibrary.org/obo/GO_0008233
• calcium-dependent cysteine-type endopeptidase activity
  http://purl.obolibrary.org/obo/GO_0004198

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName