CD21840

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD21840

CD21840

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Cd209a

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• CD209a antigen

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• CD209a antigen
• dendritic cell-specific ICAM-3-grabbing non-integrin
• CD209 antigen-like protein A

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• DC-SIGN1
• DC-SIGN
• CDSIGN
• SIGN-R1
• Dcsign
• SIGNR5
• CD209
• CIRE

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/170786

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• CD209a antigen
  http://metadb.riken.jp/db/mgi_rdf/MGI:2157942

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_133238

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000031494

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.32510

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=604672

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Santiago F. Gonzalez, et.al., Capture of influenza by medullary dendritic cells via SIGN-R1 is essential for humoral immunity in draining lymph nodes., Nature immunology, 2010, 11
  http://rdf.ncbi.nlm.nih.gov/pubmed/20305659
• Karoline W. Schjetne, et.al., A mouse C kappa-specific T cell clone indicates that DC-SIGN is an efficient target for antibody-mediated delivery of T cell epitopes for MHC class II presentation., International immunology, 2002, 14
  http://rdf.ncbi.nlm.nih.gov/pubmed/12456590
• Sean P. Saunders, et.al., C-type lectin SIGN-R1 has a role in experimental colitis and responsiveness to lipopolysaccharide., Journal of immunology (Baltimore, Md. : 1950), 2010, 184
  http://rdf.ncbi.nlm.nih.gov/pubmed/20130211
• Noella. Silva-Martin, et.al., Crystallization and preliminary X-ray diffraction studies of the carbohydrate-recognition domain of SIGN-R1, a receptor for microbial polysaccharides and sialylated antibody on splenic marginal zone macrophages., Acta crystallographica. Section F, Structural biology and crystallization communications, 2009, 65
  http://rdf.ncbi.nlm.nih.gov/pubmed/20054124
• C G. Park, et.al., Five mouse homologues of the human dendritic cell C-type lectin, DC-SIGN., International immunology, 2001, 13
  http://rdf.ncbi.nlm.nih.gov/pubmed/11581173
• Antoine. Tanne, et.al., A murine DC-SIGN homologue contributes to early host defense against Mycobacterium tuberculosis., The Journal of experimental medicine, 2009, 206
  http://rdf.ncbi.nlm.nih.gov/pubmed/19770268
• Teunis B H. Geijtenbeek, et.al., Marginal zone macrophages express a murine homologue of DC-SIGN that captures blood-borne antigens in vivo., Blood, 2002, 100
  http://rdf.ncbi.nlm.nih.gov/pubmed/12351402
• Christine. Galustian, et.al., High and low affinity carbohydrate ligands revealed for murine SIGN-R1 by carbohydrate array and cell binding approaches, and differing specificities for SIGN-R3 and langerin., International immunology, 2004, 16
  http://rdf.ncbi.nlm.nih.gov/pubmed/15136555
• Cheolho. Cheong, et.al., Microbial stimulation fully differentiates monocytes to DC-SIGN/CD209(+) dendritic cells for immune T cell areas., Cell, 2010, 143
  http://rdf.ncbi.nlm.nih.gov/pubmed/21029863
• I. Caminschi, et.al., Molecular cloning of a C-type lectin superfamily protein differentially expressed by CD8alpha(-) splenic dendritic cells., Molecular immunology, 2001, 38
  http://rdf.ncbi.nlm.nih.gov/pubmed/11684292

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• carbohydrate binding
  http://purl.obolibrary.org/obo/GO_0030246
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• endocytosis
  http://purl.obolibrary.org/obo/GO_0006897
• binding
  http://purl.obolibrary.org/obo/GO_0005488
• cargo receptor activity
  http://purl.obolibrary.org/obo/GO_0038024
• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021
• signaling receptor activity
  http://purl.obolibrary.org/obo/GO_0038023
• mannose binding
  http://purl.obolibrary.org/obo/GO_0005537

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map04145
• http://www.genome.jp/dbget-bin/www_bget?map05162
• http://www.genome.jp/dbget-bin/www_bget?map05152

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Phagosome
• Measles
• Tuberculosis