CD22270

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD22270

CD22270

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Lss

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• lanosterol synthase

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• oxidosqualene--lanosterol cyclase
• lanosterol synthase
• 2,3-epoxysqualene--lanosterol cyclase

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Osc
• D10Ertd116e
• 2810025N20Rik
• BC029082

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/16987

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• lanosterol synthase
  http://metadb.riken.jp/db/mgi_rdf/MGI:1336155

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_146006

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000033105

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.55075

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=600909

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Axel. Visel, et.al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo., Nucleic acids research, 2004, 32
  http://rdf.ncbi.nlm.nih.gov/pubmed/14681479
• Yorick. Gitton, et.al., A gene expression map of human chromosome 21 orthologues in the mouse., Nature, 2002, 420
  http://rdf.ncbi.nlm.nih.gov/pubmed/12466855
• Huaixin. Dang, et.al., Suppression of 2,3-oxidosqualene cyclase by high fat diet contributes to liver X receptor-alpha-mediated improvement of hepatic lipid profile., The Journal of biological chemistry, 2009, 284
  http://rdf.ncbi.nlm.nih.gov/pubmed/19119143
• T. Wiltshire, et.al., Perfect conserved linkage across the entire mouse chromosome 10 region homologous to human chromosome 21., Genome research, 1999, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/10613844
• Paola. Sacchetti, et.al., Liver X receptors and oxysterols promote ventral midbrain neurogenesis in vivo and in human embryonic stem cells., Cell stem cell, 2009, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/19796621
• S E. Cole, et.al., High-resolution comparative physical mapping of mouse chromosome 10 in the region of homology with human chromosome 21., Mammalian genome : official journal of the International Mammalian Genome Society, 1999, 10
  http://rdf.ncbi.nlm.nih.gov/pubmed/10051316
• Setsu. Endoh-Yamagami, et.al., A mutation in the pericentrin gene causes abnormal interneuron migration to the olfactory bulb in mice., Developmental biology, 2010, 340
  http://rdf.ncbi.nlm.nih.gov/pubmed/20096683
• Alexandre. Reymond, et.al., Human chromosome 21 gene expression atlas in the mouse., Nature, 2002, 420
  http://rdf.ncbi.nlm.nih.gov/pubmed/12466854
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• lipid biosynthetic process
  http://purl.obolibrary.org/obo/GO_0008610
• isomerase activity
  http://purl.obolibrary.org/obo/GO_0016853
• microsome
  http://purl.obolibrary.org/obo/GO_0005792
• steroid biosynthetic process
  http://purl.obolibrary.org/obo/GO_0006694
• intramolecular transferase activity
  http://purl.obolibrary.org/obo/GO_0016866
• catalytic activity
  http://purl.obolibrary.org/obo/GO_0003824
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• cholesterol biosynthetic process
  http://purl.obolibrary.org/obo/GO_0006695
• sterol metabolic process
  http://purl.obolibrary.org/obo/GO_0016125
• lanosterol synthase activity
  http://purl.obolibrary.org/obo/GO_0000250
• endoplasmic reticulum
  http://purl.obolibrary.org/obo/GO_0005783

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00100
• http://www.genome.jp/dbget-bin/www_bget?map01100

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Steroid biosynthesis
• Metabolic pathways