CD22379

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD22379

CD22379

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Setd1a

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• SET domain containing 1A

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• non-selective cation channel 1
• SET domain containing 1A

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• mNSC1
• BC010250
• Nsccn1
• KMT2F
• mKIAA0339

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/233904

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• SET domain containing 1A
  http://metadb.riken.jp/db/mgi_rdf/MGI:2446244

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_178029

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000042308

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.435494

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=611052

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Courtney M. Tate, et.al., CXXC finger protein 1 restricts the Setd1A histone H3K4 methyltransferase complex to euchromatin., The FEBS journal, 2010, 277
  http://rdf.ncbi.nlm.nih.gov/pubmed/19951360
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• K. Kutsuwada, et.al., Cloning and characterization of 5'-flanking region of mouse non-selective cation channel 1., Biochimica et biophysica acta, 1999, 1444
  http://rdf.ncbi.nlm.nih.gov/pubmed/9931454
• Noriko. Okazaki, et.al., Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries., DNA research : an international journal for rapid publication of reports on genes and genomes, 2003, 10
  http://rdf.ncbi.nlm.nih.gov/pubmed/14621295
• C David. Allis, et.al., New nomenclature for chromatin-modifying enzymes., Cell, 2007, 131
  http://rdf.ncbi.nlm.nih.gov/pubmed/18022353
• Young-Wook. Cho, et.al., PTIP associates with MLL3- and MLL4-containing histone H3 lysine 4 methyltransferase complex., The Journal of biological chemistry, 2007, 282
  http://rdf.ncbi.nlm.nih.gov/pubmed/17500065
• Christina. Wilson, et.al., mNSC1 shows no evidence of protein-coding capacity., Gene, 2006, 370
  http://rdf.ncbi.nlm.nih.gov/pubmed/16476528

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• histone H3-K4 methylation
  http://purl.obolibrary.org/obo/GO_0051568
• histone methyltransferase complex
  http://purl.obolibrary.org/obo/GO_0035097
• methylation
  http://purl.obolibrary.org/obo/GO_0032259
• methyltransferase activity
  http://purl.obolibrary.org/obo/GO_0008168
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• Set1C/COMPASS complex
  http://purl.obolibrary.org/obo/GO_0048188
• transferase activity
  http://purl.obolibrary.org/obo/GO_0016740
• histone methyltransferase activity (H3-K4 specific)
  http://purl.obolibrary.org/obo/GO_0042800

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00310

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Lysine degradation