CD22482

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD22482

CD22482

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Six1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• sine oculis-related homeobox 1 homolog (Drosophila)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• sine oculis-related homeobox 1 homolog (Drosophila)
• homeobox protein SIX1
• sine oculis homeobox homolog 1

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• BB138287

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/20471

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• sine oculis-related homeobox 1
  http://metadb.riken.jp/db/mgi_rdf/MGI:102780

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_009189

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000051367

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.4645

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=601205

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Anna. Kalousova, et.al., Dachshund homologues play a conserved role in islet cell development., Developmental biology, 2010, 348
  http://rdf.ncbi.nlm.nih.gov/pubmed/20869363
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• K. Kawakami, et.al., Identification and expression of six family genes in mouse retina., FEBS letters, 1996, 393
  http://rdf.ncbi.nlm.nih.gov/pubmed/8814301
• Yongsu. Jeong, et.al., Identification of an evolutionarily conserved, functional noncoding element regulated by Six1 homeoprotein., Genes & genetic systems, 2010, 85
  http://rdf.ncbi.nlm.nih.gov/pubmed/21041981
• H. Ohto, et.al., Tissue and developmental distribution of Six family gene products., The International journal of developmental biology, 1998, 42
  http://rdf.ncbi.nlm.nih.gov/pubmed/9551859
• http://rdf.ncbi.nlm.nih.gov/pubmed/20932939
• G. Oliver, et.al., Homeobox genes and connective tissue patterning., Development (Cambridge, England), 1995, 121
  http://rdf.ncbi.nlm.nih.gov/pubmed/7720577
• Laura L. Yates, et.al., The planar cell polarity gene Vangl2 is required for mammalian kidney-branching morphogenesis and glomerular maturation., Human molecular genetics, 2010, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/20843830
• C A. Boucher, et.al., Cloning of the human SIX1 gene and its assignment to chromosome 14., Genomics, 1996, 33
  http://rdf.ncbi.nlm.nih.gov/pubmed/8617500
• F. Spitz, et.al., Expression of myogenin during embryogenesis is controlled by Six/sine oculis homeoproteins through a conserved MEF3 binding site., Proceedings of the National Academy of Sciences of the United States of America, 1998, 95
  http://rdf.ncbi.nlm.nih.gov/pubmed/9826681

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• pharyngeal system development
  http://purl.obolibrary.org/obo/GO_0060037
• transcription regulatory region DNA binding
  http://purl.obolibrary.org/obo/GO_0044212
• thymus development
  http://purl.obolibrary.org/obo/GO_0048538
• middle ear morphogenesis
  http://purl.obolibrary.org/obo/GO_0042474
• embryonic skeletal system morphogenesis
  http://purl.obolibrary.org/obo/GO_0048704
• embryonic cranial skeleton morphogenesis
  http://purl.obolibrary.org/obo/GO_0048701
• skeletal muscle tissue development
  http://purl.obolibrary.org/obo/GO_0007519
• branching involved in ureteric bud morphogenesis
  http://purl.obolibrary.org/obo/GO_0001658
• renal system development
  http://purl.obolibrary.org/obo/GO_0072001
• positive regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0045893
• generation of neurons
  http://purl.obolibrary.org/obo/GO_0048699
• transcription factor complex
  http://purl.obolibrary.org/obo/GO_0005667
• positive regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0045944
• negative regulation of branching involved in ureteric bud morphogenesis
  http://purl.obolibrary.org/obo/GO_0090191
• pattern specification process
  http://purl.obolibrary.org/obo/GO_0007389
• organ induction
  http://purl.obolibrary.org/obo/GO_0001759
• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677
• thyroid gland development
  http://purl.obolibrary.org/obo/GO_0030878
• mesonephric tubule formation
  http://purl.obolibrary.org/obo/GO_0072172
• aorta morphogenesis
  http://purl.obolibrary.org/obo/GO_0035909
• inner ear development
  http://purl.obolibrary.org/obo/GO_0048839
• myoblast migration
  http://purl.obolibrary.org/obo/GO_0051451
• protein localization to nucleus
  http://purl.obolibrary.org/obo/GO_0034504
• sequence-specific DNA binding
  http://purl.obolibrary.org/obo/GO_0043565
• otic vesicle development
  http://purl.obolibrary.org/obo/GO_0071599
• sensory perception of sound
  http://purl.obolibrary.org/obo/GO_0007605
• chromatin binding
  http://purl.obolibrary.org/obo/GO_0003682
• negative regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0000122
• facial nerve morphogenesis
  http://purl.obolibrary.org/obo/GO_0021610
• epithelial cell differentiation
  http://purl.obolibrary.org/obo/GO_0030855
• sequence-specific DNA binding transcription factor activity
  http://purl.obolibrary.org/obo/GO_0003700
• ureteric bud development
  http://purl.obolibrary.org/obo/GO_0001657
• positive regulation of branching involved in ureteric bud morphogenesis
  http://purl.obolibrary.org/obo/GO_0090190
• positive regulation of mesenchymal cell proliferation involved in ureter development
  http://purl.obolibrary.org/obo/GO_2000729
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• regulation of branch elongation involved in ureteric bud branching
  http://purl.obolibrary.org/obo/GO_0072095
• cochlea morphogenesis
  http://purl.obolibrary.org/obo/GO_0090103
• nucleolus
  http://purl.obolibrary.org/obo/GO_0005730
• skeletal system morphogenesis
  http://purl.obolibrary.org/obo/GO_0048705
• regulation of neuron differentiation
  http://purl.obolibrary.org/obo/GO_0045664
• outflow tract morphogenesis
  http://purl.obolibrary.org/obo/GO_0003151
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• inner ear morphogenesis
  http://purl.obolibrary.org/obo/GO_0042472
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• metanephric mesenchyme development
  http://purl.obolibrary.org/obo/GO_0072075
• ureter smooth muscle cell differentiation
  http://purl.obolibrary.org/obo/GO_0072193
• negative regulation of neuron apoptotic process
  http://purl.obolibrary.org/obo/GO_0043524
• positive regulation of secondary heart field cardioblast proliferation
  http://purl.obolibrary.org/obo/GO_0072513
• kidney development
  http://purl.obolibrary.org/obo/GO_0001822
• positive regulation of ureteric bud formation
  http://purl.obolibrary.org/obo/GO_0072107
• anatomical structure development
  http://purl.obolibrary.org/obo/GO_0048856

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map05202

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Transcriptional misregulation in cancers