CD22535

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD22535

CD22535

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Cda

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• cytidine deaminase

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• cytidine deaminase
• cytidine aminohydrolase

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• 2210401N16Rik

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/72269

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• cytidine deaminase
  http://metadb.riken.jp/db/mgi_rdf/MGI:1919519

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_028176

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000028755

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.46182

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=123920

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Koji. Hase, et.al., Activation-induced cytidine deaminase deficiency causes organ-specific autoimmune disease., PloS one, 2008, 3
  http://rdf.ncbi.nlm.nih.gov/pubmed/18716662
• Axel. Visel, et.al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo., Nucleic acids research, 2004, 32
  http://rdf.ncbi.nlm.nih.gov/pubmed/14681479
• Ephraim. Sehayek, et.al., Loci controlling plasma non-HDL and HDL cholesterol levels in a C57BL /6J x CASA /Rk intercross., Journal of lipid research, 2003, 44
  http://rdf.ncbi.nlm.nih.gov/pubmed/12810823
• Ina. Rattmann, et.al., Gene transfer of cytidine deaminase protects myelopoiesis from cytidine analogs in an in vivo murine transplant model., Blood, 2006, 108
  http://rdf.ncbi.nlm.nih.gov/pubmed/16835384
• Brad G. Hoffman, et.al., Identification of transcripts with enriched expression in the developing and adult pancreas., Genome biology, 2008, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/18554416
• H. Suzuki, et.al., Protein-protein interaction panel using mouse full-length cDNAs., Genome research, 2001, 11
  http://rdf.ncbi.nlm.nih.gov/pubmed/11591653
• Aik-Hong. Teh, et.al., The 1.48 A resolution crystal structure of the homotetrameric cytidine deaminase from mouse., Biochemistry, 2006, 45
  http://rdf.ncbi.nlm.nih.gov/pubmed/16784234

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• protein homodimerization activity
  http://purl.obolibrary.org/obo/GO_0042803
• nucleoside binding
  http://purl.obolibrary.org/obo/GO_0001882
• hydrolase activity
  http://purl.obolibrary.org/obo/GO_0016787
• zinc ion binding
  http://purl.obolibrary.org/obo/GO_0008270
• identical protein binding
  http://purl.obolibrary.org/obo/GO_0042802
• negative regulation of nucleotide metabolic process
  http://purl.obolibrary.org/obo/GO_0045980
• negative regulation of cell growth
  http://purl.obolibrary.org/obo/GO_0030308
• protein homotetramerization
  http://purl.obolibrary.org/obo/GO_0051289
• cytidine deamination
  http://purl.obolibrary.org/obo/GO_0009972
• cytosol
  http://purl.obolibrary.org/obo/GO_0005829
• cytidine deaminase activity
  http://purl.obolibrary.org/obo/GO_0004126
• catalytic activity
  http://purl.obolibrary.org/obo/GO_0003824
• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

• http://www.genome.jp/dbget-bin/www_bget?map00983
• http://www.genome.jp/dbget-bin/www_bget?map00240
• http://www.genome.jp/dbget-bin/www_bget?map01100

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName

• Pyrimidine metabolism
• Metabolic pathways
• Drug metabolism - other enzymes