CD28281

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD28281

CD28281

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Nipa1

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)
• non-imprinted in Prader-Willi/Angelman syndrome 1
• non-imprinted in Prader-Willi/Angelman syndrome region protein 1 homolog
• magnesium transporter NIPA1
• spastic paraplegia 6 homolog

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Spg6
• 1110027G09Rik
• FSP3
• A830014A18Rik

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/233280

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human)
  http://metadb.riken.jp/db/mgi_rdf/MGI:2442058

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_153578

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000047037

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.443911
• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.389901

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=608145

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Jiali. Zhao, et.al., Hereditary spastic paraplegia-associated mutations in the NIPA1 gene and its Caenorhabditis elegans homolog trigger neural degeneration in vitro and in vivo through a gain-of-function mechanism., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2008, 28
  http://rdf.ncbi.nlm.nih.gov/pubmed/19091982
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• J-H. Chai, et.al., Identification of four highly conserved genes between breakpoint hotspots BP1 and BP2 of the Prader-Willi/Angelman syndromes deletion region that have undergone evolutionary transposition mediated by flanking duplicons., American journal of human genetics, 2003, 73
  http://rdf.ncbi.nlm.nih.gov/pubmed/14508708
• Bert. van der Zwaag, et.al., A co-segregating microduplication of chromosome 15q11.2 pinpoints two risk genes for autism spectrum disorder., American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics, 2010, 153B
  http://rdf.ncbi.nlm.nih.gov/pubmed/20029941
• Angela. Goytain, et.al., NIPA1(SPG6), the basis for autosomal dominant form of hereditary spastic paraplegia, encodes a functional Mg2+ transporter., The Journal of biological chemistry, 2007, 282
  http://rdf.ncbi.nlm.nih.gov/pubmed/17166836

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• early endosome
  http://purl.obolibrary.org/obo/GO_0005769
• magnesium ion transport
  http://purl.obolibrary.org/obo/GO_0015693
• ion transport
  http://purl.obolibrary.org/obo/GO_0006811
• transport
  http://purl.obolibrary.org/obo/GO_0006810
• plasma membrane
  http://purl.obolibrary.org/obo/GO_0005886
• membrane
  http://purl.obolibrary.org/obo/GO_0016020
• endosome
  http://purl.obolibrary.org/obo/GO_0005768
• integral component of membrane
  http://purl.obolibrary.org/obo/GO_0016021

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName