CD28324

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD28324

CD28324

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Mycbp2

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• MYC binding protein 2

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• pam/highwire/rpm-1 protein
• pam, highwire, rpm 1
• probable E3 ubiquitin-protein ligase MYCBP2
• Myc-binding protein 2
• MYC binding protein 2
• protein associated with Myc

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• C130061D10Rik
• R75243
• AU023734
• Pam
• AW107953
• Phr1
• AW546647

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/105689

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• MYC binding protein 2
  http://metadb.riken.jp/db/mgi_rdf/MGI:2179432

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_207215

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000033004

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.6478

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=610392

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Nicole. Garbarini, et.al., The RCC1 domain of protein associated with Myc (PAM) interacts with and regulates KCC2., Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology, 2008, 22
  http://rdf.ncbi.nlm.nih.gov/pubmed/18769030
• Huaitao. Yang, et.al., Developmental expression of PAM (protein associated with MYC) in the rodent brain., Brain research. Developmental brain research, 2002, 136
  http://rdf.ncbi.nlm.nih.gov/pubmed/12036515
• Susan. Magdaleno, et.al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system., PLoS biology, 2006, 4
  http://rdf.ncbi.nlm.nih.gov/pubmed/16602821
• Parthasarathy. Sampathkumar, et.al., Structures of PHR domains from Mus musculus Phr1 (Mycbp2) explain the loss-of-function mutation (Gly1092-->Glu) of the C. elegans ortholog RPM-1., Journal of molecular biology, 2010, 397
  http://rdf.ncbi.nlm.nih.gov/pubmed/20156452
• Sabrina. Holland, et.al., The ubiquitin ligase MYCBP2 regulates transient receptor potential vanilloid receptor 1 (TRPV1) internalization through inhibition of p38 MAPK signaling., The Journal of biological chemistry, 2011, 286
  http://rdf.ncbi.nlm.nih.gov/pubmed/21098484
• Kevin A. Peterson, et.al., Functional and comparative genomic analysis of the piebald deletion region of mouse chromosome 14., Genomics, 2002, 80
  http://rdf.ncbi.nlm.nih.gov/pubmed/12160731
• James A. Hagarman, et.al., An essential gene mutagenesis screen across the highly conserved piebald deletion region of mouse chromosome 14., Genesis (New York, N.Y. : 2000), 2009, 47
  http://rdf.ncbi.nlm.nih.gov/pubmed/19391113
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
• Robert W. Burgess, et.al., Evidence for a conserved function in synapse formation reveals Phr1 as a candidate gene for respiratory failure in newborn mice., Molecular and cellular biology, 2004, 24
  http://rdf.ncbi.nlm.nih.gov/pubmed/14729956

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• motor neuron axon guidance
  http://purl.obolibrary.org/obo/GO_0008045
• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• branchiomotor neuron axon guidance
  http://purl.obolibrary.org/obo/GO_0021785
• regulation of protein localization
  http://purl.obolibrary.org/obo/GO_0032880
• zinc ion binding
  http://purl.obolibrary.org/obo/GO_0008270
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• ligase activity
  http://purl.obolibrary.org/obo/GO_0016874
• microtubule cytoskeleton
  http://purl.obolibrary.org/obo/GO_0015630
• central nervous system projection neuron axonogenesis
  http://purl.obolibrary.org/obo/GO_0021952
• protein homodimerization activity
  http://purl.obolibrary.org/obo/GO_0042803
• axon
  http://purl.obolibrary.org/obo/GO_0030424
• regulation of cytoskeleton organization
  http://purl.obolibrary.org/obo/GO_0051493
• cell morphogenesis involved in neuron differentiation
  http://purl.obolibrary.org/obo/GO_0048667
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• protein binding
  http://purl.obolibrary.org/obo/GO_0005515

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName