CD28711

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD28711

CD28711

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Phf21a

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• PHD finger protein 21A

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• PHD finger protein 21A
• BRAF35-HDAC complex protein BHC80
• mBHC80
• BRAF35/HDAC2 complex
• BHC80a

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• PFTF1
• 80kDa
• Braf35/HDAC complex (Bhc)
• Bhc80
• D030065N23Rik
• Bhc

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/192285

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• PHD finger protein 21A
  http://metadb.riken.jp/db/mgi_rdf/MGI:2384756

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001109691
• https://www.ncbi.nlm.nih.gov/nuccore/NM_138755
• https://www.ncbi.nlm.nih.gov/nuccore/NM_001109690

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000058318

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.330408
• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.450689

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=608325

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• http://rdf.ncbi.nlm.nih.gov/pubmed/20932939
• K. Araki, et.al., Exchangeable gene trap using the Cre/mutated lox system., Cellular and molecular biology (Noisy-le-Grand, France), 1999, 45
  http://rdf.ncbi.nlm.nih.gov/pubmed/10512203
• Shigeki. Iwase, et.al., A component of BRAF-HDAC complex, BHC80, is required for neonatal survival in mice., FEBS letters, 2006, 580
  http://rdf.ncbi.nlm.nih.gov/pubmed/16684532
• Stephen N. Sansom, et.al., The level of the transcription factor Pax6 is essential for controlling the balance between neural stem cell self-renewal and neurogenesis., PLoS genetics, 2009, 5
  http://rdf.ncbi.nlm.nih.gov/pubmed/19521500
• Takuya. Taniwaki, et.al., Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette., Development, growth & differentiation, 2005, 47
  http://rdf.ncbi.nlm.nih.gov/pubmed/15840001
• Shigeki. Iwase, et.al., Characterization of BHC80 in BRAF-HDAC complex, involved in neuron-specific gene repression., Biochemical and biophysical research communications, 2004, 322
  http://rdf.ncbi.nlm.nih.gov/pubmed/15325272
• Doug. Stryke, et.al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells., Nucleic acids research, 2003, 31
  http://rdf.ncbi.nlm.nih.gov/pubmed/12520002
• Hui. Fu, et.al., A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development., The Journal of neuroscience : the official journal of the Society for Neuroscience, 2009, 29
  http://rdf.ncbi.nlm.nih.gov/pubmed/19741146
• Guoji. Guo, et.al., Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst., Developmental cell, 2010, 18
  http://rdf.ncbi.nlm.nih.gov/pubmed/20412781

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• suckling behavior
  http://purl.obolibrary.org/obo/GO_0001967
• metal ion binding
  http://purl.obolibrary.org/obo/GO_0046872
• negative regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0000122
• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677
• chromatin organization
  http://purl.obolibrary.org/obo/GO_0006325
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• chromatin binding
  http://purl.obolibrary.org/obo/GO_0003682
• histone deacetylase complex
  http://purl.obolibrary.org/obo/GO_0000118
• zinc ion binding
  http://purl.obolibrary.org/obo/GO_0008270
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• covalent chromatin modification
  http://purl.obolibrary.org/obo/GO_0016569

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName