CD29538

http://metadb.riken.jp/db/BrainTx/TranscriptomeData/CD29538

CD29538

トランスクリプトームデータ

遺伝子シンボル

http://metadb.riken.jp/db/BrainTx/geneSymbol

• Grhl3

遺伝子名

http://metadb.riken.jp/db/BrainTx/geneName

• grainyhead-like 3 (Drosophila)

別名

http://metadb.riken.jp/db/BrainTx/alt_name

• transcription factor hSOM1
• grainyhead-like 3 (Drosophila)
• sister-of-mammalian grainyhead
• grainy head-like 3
• grainyhead-like protein 3 homolog
• transcription factor CP2-like 4

別名略称

http://metadb.riken.jp/db/BrainTx/alt_symbol

• Tfcp2l4
• Som
• ct
• AI561912
• Get1

NCBI遺伝子

http://metadb.riken.jp/db/BrainTx/NCBIGene

• https://www.ncbi.nlm.nih.gov/gene/230824

MGI遺伝子

http://metadb.riken.jp/db/BrainTx/mgiGene

• grainyhead-like 3 (Drosophila)
  http://metadb.riken.jp/db/mgi_rdf/MGI:2655333

BrainTx遺伝子

http://metadb.riken.jp/db/BrainTx/brainTxGene

脳発現画像

http://metadb.riken.jp/db/BrainTx/brainExpressionImage

時系列発現 (小脳)

http://metadb.riken.jp/db/BrainTx/brainExpression

脳発現特異性/組織別発現

http://metadb.riken.jp/db/BrainTx/brainSpecificity

BrainTx遺伝子カテゴリー

http://metadb.riken.jp/db/BrainTx/brainTxGeneCategory

NCBI Accession Number

http://metadb.riken.jp/db/BrainTx/NCBIAccessionNumber

• https://www.ncbi.nlm.nih.gov/nuccore/NM_001013756

Ensembl 遺伝子

http://metadb.riken.jp/db/BrainTx/ensemblGene

• http://asia.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000037188

UniGene 遺伝子

http://metadb.riken.jp/db/BrainTx/uniGene

• https://www.ncbi.nlm.nih.gov/unigene/?term=Mm.331972

OMIM ID

http://metadb.riken.jp/db/BrainTx/omim

• https://www.omim.org/entry/603434?search=603434&highlight=608317

PubMed ID (PMID)

http://rdf.ncbi.nlm.nih.gov/pubmed/

• M. Adinolfi, et.al., Levels of alpha-fetoprotein in amniotic fluids of mice (curly-tail) with neural tube defects., Journal of medical genetics, 1976, 13
  http://rdf.ncbi.nlm.nih.gov/pubmed/65471
• S. Embury, et.al., Neural tube defects in curly-tail mice. I. Incidence, expression and similarity to the human condition., Proceedings of the Royal Society of London. Series B, Biological sciences, 1979, 206
  http://rdf.ncbi.nlm.nih.gov/pubmed/42071
• Max. Werth, et.al., The transcription factor grainyhead-like 2 regulates the molecular composition of the epithelial apical junctional complex., Development (Cambridge, England), 2010, 137
  http://rdf.ncbi.nlm.nih.gov/pubmed/20978075
• D L. Cockroft, et.al., Inositol deficiency increases the susceptibility to neural tube defects of genetically predisposed (curly tail) mouse embryos in vitro., Teratology, 1992, 45
  http://rdf.ncbi.nlm.nih.gov/pubmed/1615432
• Jacinta. Caddy, et.al., Epidermal wound repair is regulated by the planar cell polarity signaling pathway., Developmental cell, 2010, 19
  http://rdf.ncbi.nlm.nih.gov/pubmed/20643356
• Graciana. Diez-Roux, et.al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo., PLoS biology, 2011, 9
  http://rdf.ncbi.nlm.nih.gov/pubmed/21267068
• Yeliz. Boglev, et.al., The unique and cooperative roles of the Grainy head-like transcription factors in epidermal development reflect unexpected target gene specificity., Developmental biology, 2011, 349
  http://rdf.ncbi.nlm.nih.gov/pubmed/21081122
• M J. Seller, et.al., Neural tube defects in curly-tail mice. II. Effect of maternal administration of vitamin A., Proceedings of the Royal Society of London. Series B, Biological sciences, 1979, 206
  http://rdf.ncbi.nlm.nih.gov/pubmed/42072
• Yeliz. Rifat, et.al., Regional neural tube closure defined by the Grainy head-like transcription factors., Developmental biology, 2010, 345
  http://rdf.ncbi.nlm.nih.gov/pubmed/20654612
• H W. van Straaten, et.al., Deceleration and acceleration in the rate of posterior neuropore closure during neurulation in the curly tail (ct) mouse embryo., Anatomy and embryology, 1992, 185
  http://rdf.ncbi.nlm.nih.gov/pubmed/1536449

Gene Ontology

http://metadb.riken.jp/db/BrainTx/golink

• protein binding
  http://purl.obolibrary.org/obo/GO_0005515
• cochlea morphogenesis
  http://purl.obolibrary.org/obo/GO_0090103
• wound healing
  http://purl.obolibrary.org/obo/GO_0042060
• regulation of actin cytoskeleton organization
  http://purl.obolibrary.org/obo/GO_0032956
• transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006351
• sequence-specific DNA binding RNA polymerase II transcription factor activity
  http://purl.obolibrary.org/obo/GO_0000981
• pattern specification process
  http://purl.obolibrary.org/obo/GO_0007389
• regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0006357
• positive regulation of gene expression
  http://purl.obolibrary.org/obo/GO_0010628
• central nervous system development
  http://purl.obolibrary.org/obo/GO_0007417
• nucleus
  http://purl.obolibrary.org/obo/GO_0005634
• establishment of planar polarity
  http://purl.obolibrary.org/obo/GO_0001736
• positive regulation of GTPase activity
  http://purl.obolibrary.org/obo/GO_0043547
• planar cell polarity pathway involved in neural tube closure
  http://purl.obolibrary.org/obo/GO_0090179
• positive regulation of transcription from RNA polymerase II promoter
  http://purl.obolibrary.org/obo/GO_0045944
• positive regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0045893
• ectoderm development
  http://purl.obolibrary.org/obo/GO_0007398
• epidermis development
  http://purl.obolibrary.org/obo/GO_0008544
• regulation of transcription, DNA-templated
  http://purl.obolibrary.org/obo/GO_0006355
• DNA binding
  http://purl.obolibrary.org/obo/GO_0003677

InterPro ID

http://metadb.riken.jp/db/BrainTx/interPro

KEGG Pathway ID

http://metadb.riken.jp/db/BrainTx/keggPathwayID

KEGG Pathway 名称

http://metadb.riken.jp/db/BrainTx/keggPathwayName